RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 PXDC1Q5TGL8 231 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 MEX3CQ5U5Q3 659 aaKnown RBP3.63□□□□□ -1.83
BBS4-215ENST00000569001 MANEALQ5VSG8 457 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 KLHDC7AQ5VTJ3 777 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 RANBP10Q6VN20 620 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 CHST15Q7LFX5 561 aaPredicted RBP3.63□□□□□ -1.83
BBS4-215ENST00000569001 BHLHA9Q7RTU4 235 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 IRF2BP2Q7Z5L9 587 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 RAB11FIP4Q86YS3 637 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 LIX1LQ8IVB5 337 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 TTC8Q8TAM2 541 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 IGFBPL1Q8WX77 278 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 SNX22Q96L94 193 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 GJB4Q9NTQ9 266 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 OBP2AQ9NY56 170 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 VPS4AQ9UN37 437 aa3.63□□□□□ -1.83
BBS4-215ENST00000569001 BTBD19C9JJ37 291 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 TMPRSS11DO60235 418 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 RNF8O76064 485 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 NTN1O95631 604 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 MT-ND5P03915 603 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 U2AF1L5P0DN76 240 aaPredicted RBP3.62□□□□□ -1.83
BBS4-215ENST00000569001 PRF1P14222 555 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 ITGB6P18564 788 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 RHCEP18577 417 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 HTR7P34969 479 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 GPC5P78333 572 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 HTRA4P83105 476 aaPredicted RBP3.62□□□□□ -1.83
BBS4-215ENST00000569001 U2AF1Q01081 240 aaKnown RBP eCLIP3.62□□□□□ -1.83
BBS4-215ENST00000569001 RHDQ02161 417 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 GHRHRQ02643 423 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 SEMA5AQ13591 1074 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
BBS4-215ENST00000569001 CYB5RLQ6IPT4 315 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 YAF2Q8IY57 180 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 FSTL5Q8N475 847 aaPredicted RBP3.62□□□□□ -1.83
BBS4-215ENST00000569001 KAZALD1Q96I82 304 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 SAP30LQ9HAJ7 183 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 KLHL42Q9P2K6 505 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 DNAJB11Q9UBS4 358 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 ZNF212Q9UDV6 495 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 VPS51Q9UID3 782 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 SNX13Q9Y5W8 968 aa3.62□□□□□ -1.83
BBS4-215ENST00000569001 A0A087WZ62 844 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 C16orf96A6NNT2 1141 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 ATF3P18847 181 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 GALNSP34059 522 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 CCT4P50991 539 aaKnown RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 EIF4A1P60842 406 aaKnown RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 FAM193AP78312 1265 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 CFHR3Q02985 330 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 FHL1Q13642 323 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 GBX1Q14549 363 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 P3H2Q8IVL5 708 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 C12orf76Q8N812 135 aaPredicted RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 ZNF548Q8NEK5 533 aaPredicted RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 ZNF398Q8TD17 642 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 COQ8BQ96D53 544 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 LRRC46Q96FV0 321 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 SIGLEC11Q96RL6 698 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 SCNM1Q9BWG6 230 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 DHX36Q9H2U1 1008 aaKnown RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 MLXIPLQ9NP71 852 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 VPS45Q9NRW7 570 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 NKX1-2Q9UD57 310 aaPredicted RBP3.61□□□□□ -1.83
BBS4-215ENST00000569001 STEAP1Q9UHE8 339 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 PCDHB2Q9Y5E7 798 aa3.61□□□□□ -1.83
BBS4-215ENST00000569001 SETD1BQ9UPS6 1966 aaKnown RBP3.6□□□□□ -1.83
BBS4-215ENST00000569001 AQP7P3A6NL99 342 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 H3BNC9 293 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 M0R3H8 397 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 SOCS2O14508 198 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 RRHO14718 337 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 KPNA5O15131 536 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 SNX2O60749 519 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 MBPP02686 304 aaPredicted RBP3.6□□□□□ -1.83
BBS4-215ENST00000569001 HRGP04196 525 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 PHKG2P15735 406 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 ADRA1DP25100 572 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 RBL1P28749 1068 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 ATICP31939 592 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 PBX1P40424 430 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 PIK3CBP42338 1070 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 COPAP53621 1224 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 LINC00205P59089 165 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 RAE1P78406 368 aaKnown RBP3.6□□□□□ -1.83
BBS4-215ENST00000569001 CFHR1Q03591 330 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 GFOD2Q3B7J2 385 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 RNF44Q7L0R7 432 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 SRGAP1Q7Z6B7 1085 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 C16orf52Q8NHV5 167 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 CUL5Q93034 780 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 HMCESQ96FZ2 354 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 WACQ9BTA9 647 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 SELENOOQ9BVL4 669 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 TM2D2Q9BX73 214 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 SLC25A32Q9H2D1 315 aa3.6□□□□□ -1.83
BBS4-215ENST00000569001 FOXP1Q9H334 677 aaPredicted RBP3.6□□□□□ -1.83
BBS4-215ENST00000569001 HEY2Q9UBP5 337 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms