RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 AEBP2Q6ZN18 517 aaPredicted RBP19.59■□□□□ 0.73
BBS4-215ENST00000569001 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
BBS4-215ENST00000569001 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
BBS4-215ENST00000569001 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
BBS4-215ENST00000569001 FOXD1Q16676 465 aa15.46■□□□□ 0.07
BBS4-215ENST00000569001 PLPPR3Q6T4P5 718 aa15.13■□□□□ 0.01
BBS4-215ENST00000569001 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
BBS4-215ENST00000569001 ADRA2BP18089 450 aa14.73□□□□□ -0.05
BBS4-215ENST00000569001 PIAS4Q8N2W9 510 aaPredicted RBP14.51□□□□□ -0.09
BBS4-215ENST00000569001 MSH5O43196 834 aa14.22□□□□□ -0.13
BBS4-215ENST00000569001 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
BBS4-215ENST00000569001 POTEDQ86YR6 584 aa13.46□□□□□ -0.25
BBS4-215ENST00000569001 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
BBS4-215ENST00000569001 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
BBS4-215ENST00000569001 DMRT2Q9Y5R5 561 aa13.17□□□□□ -0.3
BBS4-215ENST00000569001 CNKSR2Q8WXI2 1034 aa12.98□□□□□ -0.33
BBS4-215ENST00000569001 KCNA4P22459 653 aa12.86□□□□□ -0.35
BBS4-215ENST00000569001 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
BBS4-215ENST00000569001 HOXD11P31277 338 aaPredicted RBP12.79□□□□□ -0.36
BBS4-215ENST00000569001 NPM3O75607 178 aaKnown RBP12.78□□□□□ -0.36
BBS4-215ENST00000569001 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
BBS4-215ENST00000569001 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
BBS4-215ENST00000569001 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
BBS4-215ENST00000569001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.24□□□□□ -0.45
BBS4-215ENST00000569001 RNF39Q9H2S5 420 aa12.23□□□□□ -0.45
BBS4-215ENST00000569001 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
BBS4-215ENST00000569001 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
BBS4-215ENST00000569001 CACNB1Q02641 598 aaPredicted RBP12.1□□□□□ -0.47
BBS4-215ENST00000569001 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
BBS4-215ENST00000569001 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
BBS4-215ENST00000569001 ZBTB22O15209 634 aa11.87□□□□□ -0.51
BBS4-215ENST00000569001 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
BBS4-215ENST00000569001 FOXD4L1Q9NU39 408 aa11.81□□□□□ -0.52
BBS4-215ENST00000569001 MYCNP04198 464 aaPredicted RBP11.75□□□□□ -0.53
BBS4-215ENST00000569001 CAPN15O75808 1086 aa11.74□□□□□ -0.53
BBS4-215ENST00000569001 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
BBS4-215ENST00000569001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
BBS4-215ENST00000569001 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
BBS4-215ENST00000569001 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
BBS4-215ENST00000569001 EHMT2Q96KQ7 1210 aa11.65□□□□□ -0.54
BBS4-215ENST00000569001 ATF5Q9Y2D1 282 aaPredicted RBP11.6□□□□□ -0.55
BBS4-215ENST00000569001 ABCB7O75027 752 aa11.57□□□□□ -0.56
BBS4-215ENST00000569001 DSG3P32926 999 aa11.57□□□□□ -0.56
BBS4-215ENST00000569001 APLP2Q06481 763 aa11.56□□□□□ -0.56
BBS4-215ENST00000569001 CSRNP3Q8WYN3 585 aa11.55□□□□□ -0.56
BBS4-215ENST00000569001 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
BBS4-215ENST00000569001 POLA2Q14181 598 aa11.39□□□□□ -0.59
BBS4-215ENST00000569001 ATXN8OSP0DMR3 200 aa11.33□□□□□ -0.6
BBS4-215ENST00000569001 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
BBS4-215ENST00000569001 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
BBS4-215ENST00000569001 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
BBS4-215ENST00000569001 FBLN2P98095 1184 aa10.97□□□□□ -0.65
BBS4-215ENST00000569001 RBM42Q9BTD8 480 aaKnown RBP10.93□□□□□ -0.66
BBS4-215ENST00000569001 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
BBS4-215ENST00000569001 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
BBS4-215ENST00000569001 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
BBS4-215ENST00000569001 AKT1S1Q96B36 256 aa10.78□□□□□ -0.68
BBS4-215ENST00000569001 REM2Q8IYK8 340 aaPredicted RBP10.75□□□□□ -0.69
BBS4-215ENST00000569001 ZNF692Q9BU19 519 aaPredicted RBP10.75□□□□□ -0.69
BBS4-215ENST00000569001 SSUH2Q9Y2M2 353 aa10.7□□□□□ -0.7
BBS4-215ENST00000569001 PITPNM1O00562 1244 aa10.66□□□□□ -0.7
BBS4-215ENST00000569001 CHRDL2Q6WN34 429 aa10.66□□□□□ -0.7
BBS4-215ENST00000569001 PABPN1Q86U42 306 aaKnown RBP eCLIP10.64□□□□□ -0.71
BBS4-215ENST00000569001 SPDYE4A6NLX3 237 aa10.63□□□□□ -0.71
BBS4-215ENST00000569001 POTEHQ6S545 545 aa10.59□□□□□ -0.71
BBS4-215ENST00000569001 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
BBS4-215ENST00000569001 SPDYE1Q8NFV5 336 aaPredicted RBP10.52□□□□□ -0.73
BBS4-215ENST00000569001 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
BBS4-215ENST00000569001 FKBP8Q14318 412 aa10.47□□□□□ -0.73
BBS4-215ENST00000569001 FXR2P51116 673 aaKnown RBP eCLIP10.44□□□□□ -0.74
BBS4-215ENST00000569001 PRR29P0C7W0 189 aa10.4□□□□□ -0.74
BBS4-215ENST00000569001 CHADLQ6NUI6 762 aa10.39□□□□□ -0.75
BBS4-215ENST00000569001 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
BBS4-215ENST00000569001 PROM2Q8N271 834 aa10.37□□□□□ -0.75
BBS4-215ENST00000569001 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
BBS4-215ENST00000569001 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
BBS4-215ENST00000569001 HAX1O00165 279 aa10.23□□□□□ -0.77
BBS4-215ENST00000569001 EVX2Q03828 476 aa10.2□□□□□ -0.78
BBS4-215ENST00000569001 FARP1Q9Y4F1 1045 aaPredicted RBP10.18□□□□□ -0.78
BBS4-215ENST00000569001 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
BBS4-215ENST00000569001 MIER1Q8N108 512 aa10.11□□□□□ -0.79
BBS4-215ENST00000569001 C19orf67A6NJJ6 358 aa10.1□□□□□ -0.79
BBS4-215ENST00000569001 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
BBS4-215ENST00000569001 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
BBS4-215ENST00000569001 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
BBS4-215ENST00000569001 FBXO3Q9UK99 471 aa10.02□□□□□ -0.81
BBS4-215ENST00000569001 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
BBS4-215ENST00000569001 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
BBS4-215ENST00000569001 ZRANB1Q9UGI0 708 aa9.98□□□□□ -0.81
BBS4-215ENST00000569001 PLEKHG5O94827 1062 aa9.97□□□□□ -0.81
BBS4-215ENST00000569001 TSPYL2Q9H2G4 693 aaPredicted RBP9.94□□□□□ -0.82
BBS4-215ENST00000569001 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
BBS4-215ENST00000569001 PHF12Q96QT6 1004 aa9.92□□□□□ -0.82
BBS4-215ENST00000569001 GABBR2O75899 941 aa9.91□□□□□ -0.82
BBS4-215ENST00000569001 PAK3O75914 559 aaPredicted RBP9.88□□□□□ -0.83
BBS4-215ENST00000569001 KLHL34Q8N239 644 aa9.88□□□□□ -0.83
BBS4-215ENST00000569001 NUBP1P53384 320 aa9.87□□□□□ -0.83
BBS4-215ENST00000569001 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
BBS4-215ENST00000569001 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
BBS4-215ENST00000569001 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms