RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 CCNJLQ8IV13 435 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 KBTBD2Q8IY47 623 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 SH3TC2Q8TF17 1288 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 GIPC3Q8TF64 312 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 APOL2Q9BQE5 337 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPON2Q9BUD6 331 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PLGRKTQ9HBL7 147 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ERVK-5Q9HDB9 667 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 AK5Q9Y6K8 562 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 FOXO6A8MYZ6 492 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 SLCO1B7G3V0H7 640 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ASNA1O43681 348 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 FGFR2P21802 821 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 CASP7P55210 303 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 RBP5P82980 135 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZNF618Q5T7W0 954 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 IRF2BP2Q7Z5L9 587 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 BHLHE22Q8NFJ8 381 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 NAT9Q9BTE0 207 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 NT5C1AQ9BXI3 368 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 IARS2Q9NSE4 1012 aaKnown RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 UBDO15205 165 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 H2AFYO75367 372 aaKnown RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 CASP5P51878 434 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PRKCEQ02156 737 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 FOLH1Q04609 750 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 BFSP2Q13515 415 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 NFYCQ13952 458 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 DCAF6Q58WW2 860 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 TTC7BQ86TV6 843 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 DHFR2Q86XF0 187 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ABRAQ8N0Z2 381 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARL10Q8N8L6 244 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ASAP3Q8TDY4 903 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 IL17RBQ9NRM6 502 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 USP18Q9UMW8 372 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 CSPG5O95196 566 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 RXRBP28702 533 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 CCNA1P78396 465 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 BAATQ14032 418 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 CCDC80Q76M96 950 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 POLNQ7Z5Q5 900 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 ALYREFQ86V81 257 aaKnown RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 GSTCDQ8NEC7 633 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PIWIL2Q8TC59 973 aaKnown RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 OMA1Q96E52 524 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PIH1D1Q9NWS0 290 aaKnown RBP12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 PCDHGB4Q9UN71 923 aa12.78□□□□□ -0.36
CSPG4P13-202ENST00000567704 MST1RQ04912 1400 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 A0A1W2PPM1 405 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 KANSL1LA0AUZ9 987 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 SMIM22K7EJ46 135 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 TRIM13O60858 407 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 LYNP07948 512 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 PSMB9P28065 219 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 IFNA8P32881 189 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 SFSWAPQ12872 951 aaKnown RBP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 CIAPIN1Q6FI81 312 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 CLNKQ7Z7G1 428 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 TRABD2AQ86V40 505 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 FAR2Q96K12 515 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 LRRC19Q9H756 370 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 NCKIPSDQ9NZQ3 722 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 SYNDIG1LA6NDD5 238 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 INPP4BO15327 924 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 PSMD3O43242 534 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 LZTS3O60299 673 aaPredicted RBP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 ZC3H11AO75152 810 aaKnown RBP eCLIP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 ARP10275 920 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 UBAP2LQ14157 1087 aaKnown RBP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 SPOUT1Q5T280 376 aaKnown RBP12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 LPCAT4Q643R3 524 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 NAPEPLDQ6IQ20 393 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 FBXW8Q8N3Y1 598 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 APBB2Q92870 758 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 ITGB1BP2Q9UKP3 347 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 TMCO1Q9UM00 188 aa12.77□□□□□ -0.36
CSPG4P13-202ENST00000567704 BANF1O75531 89 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 NPTXRO95502 500 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 FAM86B2P0C5J1 330 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 NPTX2P47972 431 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 MGAT5Q09328 741 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 KRR1Q13601 381 aaKnown RBP12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 KRT72Q14CN4 511 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 DHRSXQ8N5I4 330 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 RIOX1Q9H6W3 641 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 SAE1Q9UBE0 346 aaPredicted RBP12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 RABGEF1Q9UJ41 708 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 CROTQ9UKG9 612 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 ACOT9Q9Y305 439 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 GPR75-ASB3A0A0A6YYF3 556 aa12.77□□□□□ -0.37
CSPG4P13-202ENST00000567704 CYTH3O43739 400 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms