RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 USP3Q9Y6I4 520 aa16.09■□□□□ 0.17
RPL28-207ENST00000558815 USP34Q70CQ2 3546 aa16.08■□□□□ 0.17
RPL28-207ENST00000558815 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 PAEPP09466 180 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 TDGF1P13385 188 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 LCP1P13796 627 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 SLC6A11P48066 632 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 YWHAGP61981 247 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPL28-207ENST00000558815 GCNT1Q02742 428 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 KDSRQ06136 332 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 GAB4Q2WGN9 574 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 ANO4Q32M45 955 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 RHBDF2Q6PJF5 856 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 RSRC2Q7L4I2 434 aaKnown RBP16.08■□□□□ 0.16
RPL28-207ENST00000558815 TADA2BQ86TJ2 420 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 IRF2BP1Q8IU81 584 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 NAT16Q8N8M0 369 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 RPLP0P6Q8NHW5 317 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
RPL28-207ENST00000558815 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
RPL28-207ENST00000558815 SEMA4AQ9H3S1 761 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 DNMT3LQ9UJW3 386 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 KIAA1257Q9ULG3 409 aa16.08■□□□□ 0.16
RPL28-207ENST00000558815 PES1O00541 588 aaKnown RBP16.07■□□□□ 0.16
RPL28-207ENST00000558815 ZBED1O96006 694 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 SLC9A1P19634 815 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 USP8P40818 1118 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 PXNP49023 591 aaPredicted RBP16.07■□□□□ 0.16
RPL28-207ENST00000558815 NRLP54845 237 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 APBA1Q02410 837 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 GAD2Q05329 585 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 LPAL2Q16609 132 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 FBXO43Q4G163 708 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 RAB41Q5JT25 222 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 BTBD8Q5XKL5 378 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 MAMSTRQ6ZN01 415 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 KIAA1958Q8N8K9 716 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 ZBTB44Q8NCP5 570 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 SECISBP2LQ93073 1101 aaKnown RBP16.07■□□□□ 0.16
RPL28-207ENST00000558815 OTUB2Q96DC9 234 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 ZSWIM1Q9BR11 485 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 FAM126AQ9BYI3 521 aaPredicted RBP16.07■□□□□ 0.16
RPL28-207ENST00000558815 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 THAP9Q9H5L6 903 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPL28-207ENST00000558815 SLC8A2Q9UPR5 921 aa16.07■□□□□ 0.16
RPL28-207ENST00000558815 ANTXRLA6NF34 631 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 K7ESF4 209 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 ATG13O75143 517 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
RPL28-207ENST00000558815 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 SRSF5Q13243 272 aaKnown RBP16.06■□□□□ 0.16
RPL28-207ENST00000558815 C2orf27AQ580R0 203 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 LCLAT1Q6UWP7 414 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 PRR23BQ6ZRT6 265 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 TPGS1Q6ZTW0 290 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 SFTPA1Q8IWL2 248 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 NELL1Q92832 810 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 BHMTQ93088 406 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 HHIPQ96QV1 700 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 PNKPQ96T60 521 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 SPHK2Q9NRA0 654 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 CLIC5Q9NZA1 410 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 DMDP11532 3685 aa16.06■□□□□ 0.16
RPL28-207ENST00000558815 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 LILRB5O75023 590 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 STC2O76061 302 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 APODP05090 189 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 ZNF132P52740 706 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 MFAP3P55082 362 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 MESP2Q0VG99 397 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 STILQ15468 1287 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 CNGA2Q16280 664 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 HTR3DQ70Z44 454 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 RNF139Q8WU17 664 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 EDEM1Q92611 657 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 CDK5RAP1Q96SZ6 601 aaKnown RBP16.05■□□□□ 0.16
RPL28-207ENST00000558815 ZDHHC4Q9NPG8 344 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 NCDNQ9UBB6 729 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 STRIP2Q9ULQ0 834 aa16.05■□□□□ 0.16
RPL28-207ENST00000558815 SMG5Q9UPR3 1016 aaKnown RBP16.05■□□□□ 0.16
RPL28-207ENST00000558815 ZFHX2Q9C0A1 2572 aaPredicted RBP16.04■□□□□ 0.16
RPL28-207ENST00000558815 YJEFN3A6XGL0 299 aa16.04■□□□□ 0.16
RPL28-207ENST00000558815 E7ENQ6 273 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms