RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 FAM212AQ96EL1 285 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 PKMYT1Q99640 499 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 ACBD6Q9BR61 282 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 C6orf106Q9H6K1 298 aaPredicted RBP13.28□□□□□ -0.28
SNRPF-204ENST00000552085 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 ADAMTS1Q9UHI8 967 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 GTF3C4Q9UKN8 822 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.28□□□□□ -0.28
SNRPF-204ENST00000552085 STON1Q9Y6Q2 735 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
SNRPF-204ENST00000552085 KPNA7A9QM74 516 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 MT-CO3P00414 261 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ABL1P00519 1130 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ACADMP11310 421 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 MUTP22033 750 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ACAT1P24752 427 aaKnown RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 PPP3CCP48454 512 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ZNF132P52740 706 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 GABREP78334 506 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 TMEM132DQ14C87 1099 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 LINC00303Q3SY05 128 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 FAM124AQ86V42 546 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 SPATA2LQ8IUW3 424 aaPredicted RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 SAP25Q8TEE9 199 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 FUBP3Q96I24 572 aaKnown RBP eCLIP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 SPATA17Q96L03 361 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ELF4Q99607 663 aaPredicted RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 NTPCRQ9BSD7 190 aaKnown RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 C17orf75Q9HAS0 396 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 GJB4Q9NTQ9 266 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 DDX43Q9NXZ2 648 aaKnown RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 DERAQ9Y315 318 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 USP9YO00507 2555 aaPredicted RBP13.27□□□□□ -0.29
SNRPF-204ENST00000552085 ABCA12Q86UK0 2595 aa13.27□□□□□ -0.29
SNRPF-204ENST00000552085 WNT7AO00755 349 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 FAM189A1O60320 539 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 CACNG3O60359 315 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 CKMT2P17540 419 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 ITGB6P18564 788 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 MAGEA11P43364 429 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 USP46P62068 366 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 MYL7Q01449 175 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 NR5A1Q13285 461 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 CCDC142Q17RM4 750 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 SV2CQ496J9 727 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 PRAMEF14Q5SWL7 426 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 DENND5BQ6ZUT9 1274 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 BBS7Q8IWZ6 715 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 ARID1BQ8NFD5 2236 aaPredicted RBP13.26□□□□□ -0.29
SNRPF-204ENST00000552085 VCPIP1Q96JH7 1222 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 XPO6Q96QU8 1125 aaKnown RBP13.26□□□□□ -0.29
SNRPF-204ENST00000552085 MMS19Q96T76 1030 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 TMEM60Q9H2L4 133 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 ASCL3Q9NQ33 180 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 THSD1Q9NS62 852 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 EHD2Q9NZN4 543 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 CYP46A1Q9Y6A2 500 aa13.26□□□□□ -0.29
SNRPF-204ENST00000552085 BLACEA4D250 179 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 VILLO15195 856 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 OGTO15294 1046 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 EPB41L2O43491 1005 aaKnown RBP13.25□□□□□ -0.29
SNRPF-204ENST00000552085 CD27P26842 260 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 LSSP48449 732 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 C21orf59P57076 290 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 MAPK7Q13164 816 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 SHBQ15464 509 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 ECM1Q16610 540 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 TMEM161BQ8NDZ6 487 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 TNFRSF25Q93038 417 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 BIRC7Q96CA5 298 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 LIN37Q96GY3 246 aaPredicted RBP13.25□□□□□ -0.29
SNRPF-204ENST00000552085 CEP295NLQ96MC4 621 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 DUSP9Q99956 384 aaKnown RBP13.25□□□□□ -0.29
SNRPF-204ENST00000552085 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 ACE2Q9BYF1 805 aaPredicted RBP13.25□□□□□ -0.29
SNRPF-204ENST00000552085 POLR1BQ9H9Y6 1135 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 CACNA1DQ01668 2161 aa13.25□□□□□ -0.29
SNRPF-204ENST00000552085 BOD1L1Q8NFC6 3051 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 NEDD8-MDP1E9PL57 170 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 YKT6O15498 198 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 MAPTP10636 758 aaKnown RBP13.24□□□□□ -0.29
SNRPF-204ENST00000552085 ACSL1P33121 698 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 KRT2P35908 639 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 E2F1Q01094 437 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 ST3GAL1Q11201 340 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 HAUS3Q68CZ6 603 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 CACUL1Q86Y37 369 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 BICD1Q96G01 975 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 ZNF560Q96MR9 790 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 ARHGAP9Q9BRR9 750 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 TM6SF1Q9BZW5 370 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 DPP3Q9NY33 737 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 LRWD1Q9UFC0 647 aa13.24□□□□□ -0.29
SNRPF-204ENST00000552085 RELNP78509 3460 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 C2CD3Q4AC94 2353 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
SNRPF-204ENST00000552085 SYNCRIPO60506 623 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms