RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 DNASE1L2Q92874 299 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 ASIC4Q96FT7 647 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 CDK5RAP1Q96SZ6 601 aaKnown RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 LSM14BQ9BX40 385 aaKnown RBP7.65□□□□□ -1.18
GYPB-206ENST00000506516 STK33Q9BYT3 514 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SMOC2Q9H3U7 446 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 SIX2Q9NPC8 291 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 PLCB1Q9NQ66 1216 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 BRWD1Q9NSI6 2320 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.65□□□□□ -1.18
GYPB-206ENST00000506516 USP3Q9Y6I4 520 aa7.65□□□□□ -1.18
GYPB-206ENST00000506516 C2orf16Q68DN1 1984 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 C2orf78A6NCI8 922 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 FAM86C2PA6NEL3 165 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 LGALS16A8MUM7 142 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 M0QYV0 167 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 FOXN3O00409 490 aaPredicted RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 CYP26A1O43174 497 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 THAP12O43422 761 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 TADA3O75528 432 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ZBED1O96006 694 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ZDHHC11BP0C7U3 371 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 MBL2P11226 248 aaPredicted RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 GLULP15104 373 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 BRD2P25440 801 aaKnown RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 KRT9P35527 623 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ATP5C1P36542 298 aaKnown RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 PLA2G4AP47712 749 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 RPIAP49247 311 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 TUBP50607 506 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 TKTL1P51854 596 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SNX16P57768 344 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SLC7A9P82251 487 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 AMPD2Q01433 879 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 APBA1Q02410 837 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 PRKCQQ04759 706 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 GOLGA8FQ08AF8 430 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 GOLGA8DPQ0D2H9 430 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 FCHO2Q0JRZ9 810 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 RAPGEF1Q13905 1077 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 DRAP1Q14919 205 aaPredicted RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 IQCB1Q15051 598 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SYCP1Q15431 976 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 MEA1Q16626 185 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 RAB41Q5JT25 222 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 C1orf228Q6PIY5 440 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 CCDC186Q7Z3E2 898 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 DDX42Q86XP3 938 aaKnown RBP eCLIP7.64□□□□□ -1.19
GYPB-206ENST00000506516 SIX5Q8N196 739 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SIX6OS1Q8N1H7 587 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ZNF276Q8N554 614 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 TTC16Q8NEE8 873 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 FLCNQ8NFG4 579 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 NEK11Q8NG66 645 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 STK32AQ8WU08 396 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SLC35F5Q8WV83 523 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 TFAP2BQ92481 460 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 GOLGA1Q92805 767 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 USP13Q92995 863 aaPredicted RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 SECISBP2LQ93073 1101 aaKnown RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 HSFY1Q96LI6 401 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SLC22A12Q96S37 553 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 NELL2Q99435 816 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 LRFN3Q9BTN0 628 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 RNF38Q9H0F5 515 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 SMG9Q9H0W8 520 aaKnown RBP7.64□□□□□ -1.19
GYPB-206ENST00000506516 HSD3B7Q9H2F3 369 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 PDCL3Q9H2J4 239 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 CBX8Q9HC52 389 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ARHGEF3Q9NR81 526 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 GKN1Q9NS71 199 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 GMIPQ9P107 970 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 NAGPAQ9UK23 515 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 CA14Q9ULX7 337 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 ARHGAP26Q9UNA1 814 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 CEP83Q9Y592 693 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 DENND4AQ7Z401 1863 aa7.64□□□□□ -1.19
GYPB-206ENST00000506516 LEFTY2O00292 366 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 TULP2O00295 520 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 MAN2B1O00754 1011 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 SLC9A3R1O14745 358 aaPredicted RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 COCHO43405 550 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 TLR5O60602 858 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 PRAMEF12O95522 483 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 OLFM2O95897 454 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 OAS1P00973 400 aaKnown RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 RARGP13631 454 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 ATP1A3P13637 1013 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 LCP1P13796 627 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 TCF3P15923 654 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 GPD2P43304 727 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 ACADSBP45954 432 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 CLCN5P51795 746 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 KPNA1P52294 538 aaPredicted RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 MLLT6P55198 1093 aaPredicted RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 STARD6P59095 220 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 POLR2FP61218 127 aaKnown RBP7.63□□□□□ -1.19
GYPB-206ENST00000506516 MTF1Q14872 753 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 PDGFRLQ15198 375 aa7.63□□□□□ -1.19
GYPB-206ENST00000506516 MLF2Q15773 248 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms