RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SYT2Q8N9I0 419 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TDRD5Q8NAT2 981 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 DTWD2Q8NBA8 298 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 POGLUT1Q8NBL1 392 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 ZBTB44Q8NCP5 570 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GIMAP7Q8NHV1 300 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 UHMK1Q8TAS1 419 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SPATA20Q8TB22 786 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 METTL6Q8TCB7 284 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 CSGALNACT1Q8TDX6 532 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SH3RF2Q8TEC5 729 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SH3RF3Q8TEJ3 882 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SMCR8Q8TEV9 937 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SLC22A17Q8WUG5 538 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 WDR60Q8WVS4 1066 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MARVELD3Q96A59 401 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 VPS33AQ96AX1 596 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 C3orf49Q96BT1 292 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KTI12Q96EK9 354 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PGAP3Q96FM1 320 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PTCHD1Q96NR3 888 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 DMRTA2Q96SC8 542 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 FAM118BQ9BPY3 351 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TCHPQ9BT92 498 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 FTOQ9C0B1 505 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 BRD8Q9H0E9 1235 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 LIN28AQ9H9Z2 209 aaKnown RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 FANCFQ9NPI8 374 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SNTG1Q9NSN8 517 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SIRT3Q9NTG7 399 aaPredicted RBP3.08□□□□□ -1.92
HMGN4-202ENST00000477243 DECR2Q9NUI1 292 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GIMAP4Q9NUV9 329 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 TMLHEQ9NVH6 421 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 RIC8BQ9NVN3 520 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 GALNT8Q9NY28 637 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SRRDQ9UH36 339 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SUFUQ9UMX1 484 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 AP4E1Q9UPM8 1137 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 NAALADL1Q9UQQ1 740 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 KIF27Q86VH2 1401 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 SETD5Q9C0A6 1442 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 MLH3Q9UHC1 1453 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 UGGT1Q9NYU2 1555 aa3.08□□□□□ -1.92
HMGN4-202ENST00000477243 A0A1W2PQ09 198 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 CLRN2A0PK11 232 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 ARHGAP10A1A4S6 786 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 VWA3AA6NCI4 1184 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 A8MVJ9 347 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 AKR1B15C9JRZ8 316 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 F8W031 263 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 H0YAE9 185 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 MYO1CO00159 1063 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF263O14978 683 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PGRMC2O15173 223 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 FGF10O15520 208 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 DNPH1O43598 174 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 KINO60870 393 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 COQ9O75208 318 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 LRRN2O75325 713 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 GJB3O75712 270 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 RASSF9O75901 435 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 SASH1O94885 1247 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 ZNF205O95201 554 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PCDH8O95206 1070 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 MMEP08473 750 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 SPARCP09486 303 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 MYBL1P10243 752 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 CYP2A6P11509 494 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PFKLP17858 780 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PTPN1P18031 435 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 KRT4P19013 534 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 IL4RP24394 825 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 EPHA8P29322 1005 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 TM4SF1P30408 202 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PPARGP37231 505 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 MATR3P43243 847 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 GPD2P43304 727 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 IFNAR2P48551 515 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 AMPHP49418 695 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 FLT3LGP49771 235 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 GSK3AP49840 483 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 CDK7P50613 346 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 RBM5P52756 815 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 RRP1P56182 461 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 SOX8P57073 446 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 PCBP3P57721 371 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 STARD6P59095 220 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 EIF4A1P60842 406 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 SOX4Q06945 474 aaPredicted RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 SRSF1Q07955 248 aaKnown RBP eCLIP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 MYO1EQ12965 1108 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 RALGDSQ12967 914 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 RPA4Q13156 261 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 DCTN2Q13561 401 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 LAPTM5Q13571 262 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 LASP1Q14847 261 aaKnown RBP3.07□□□□□ -1.92
HMGN4-202ENST00000477243 NFIXQ14938 502 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 GRIK5Q16478 980 aa3.07□□□□□ -1.92
HMGN4-202ENST00000477243 DBN1Q16643 649 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms