RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 PDGFCQ9NRA1 345 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 E9PBE3 544 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 ZBTB22O15209 634 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 KLHL41O60662 606 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CSTF3Q12996 717 aaKnown RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 KIRREL3Q8IZU9 778 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 COLGALT1Q8NBJ5 622 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TATDN2Q93075 761 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 PPP1R14AQ96A00 147 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 PLA2G4CQ9UP65 541 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 MAP3K13O43283 966 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TPH1P17752 444 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 HALP42357 657 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TMC7Q7Z402 723 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
VAPB-204ENST00000475243 UCMAQ8WVF2 138 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 SERAC1Q96JX3 654 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 CAPN6Q9Y6Q1 641 aa11.3□□□□□ -0.6
VAPB-204ENST00000475243 TMEM150BA6NC51 233 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 APOA4P06727 396 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ERVK-10P10266 1014 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ATP6V1B2P21281 511 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 FGFR2P21802 821 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 CCND1P24385 295 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ACOX2Q99424 681 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 UBXN6Q9BZV1 441 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SMPD4Q9NXE4 827 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TRPC4Q9UBN4 977 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 O00370 1275 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 GLRA3O75311 464 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SERPINB3P29508 390 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 FNTAP49354 379 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TOB1P50616 345 aaPredicted RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 STX5Q13190 355 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ATP8B4Q8TF62 1192 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ADGRE3Q9BY15 652 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 CARD9Q9H257 536 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TRPM5Q9NZQ8 1165 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 RHOAP61586 193 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 PSMC6P62333 389 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ADIGQ0VDE8 80 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SEL1L3Q68CR1 1132 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 EFL1Q7Z2Z2 1120 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 ERO1BQ86YB8 467 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ZDHHC15Q96MV8 337 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TOMM70O94826 608 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 GLP2RO95838 553 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 HSMCR30P0CW71 290 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SREBF1P36956 1147 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TDRD5Q8NAT2 981 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 CENPTQ96BT3 561 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 STN1Q9H668 368 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 LRRC40Q9H9A6 602 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 ADARB2Q9NS39 739 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 TBC1D23Q9NUY8 699 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 LNPEPQ9UIQ6 1025 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SPACA6W5XKT8 324 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 UNC13BO14795 1591 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 CYP2F1P24903 491 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 NFYCQ13952 458 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 PDIA6Q15084 440 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 PDK2Q15119 407 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 COL23A1Q86Y22 540 aaPredicted RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 RRAGCQ9HB90 399 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 VANGL2Q9ULK5 521 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 SNX13Q9Y5W8 968 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TECPR2O15040 1411 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 GRK3P35626 688 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 CDH8P55286 799 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 PPP4CP60510 307 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 CYLC2Q14093 348 aaPredicted RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 PTGISQ16647 500 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 TRAF7Q6Q0C0 670 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 PABPC3Q9H361 631 aaKnown RBP11.29□□□□□ -0.6
VAPB-204ENST00000475243 RBM22Q9NW64 420 aaKnown RBP eCLIP11.29□□□□□ -0.6
VAPB-204ENST00000475243 DNAJC16Q9Y2G8 782 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 DYRK1BQ9Y463 629 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 C1orf167Q5SNV9 1468 aa11.29□□□□□ -0.6
VAPB-204ENST00000475243 DDTLA6NHG4 134 aaPredicted RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 VCLP18206 1134 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CYP24A1Q07973 514 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 ZNF438Q7Z4V0 828 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CCDC103Q8IW40 242 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
VAPB-204ENST00000475243 GPAMQ9HCL2 828 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 NEXMIFQ5QGS0 1516 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 H3BRB1 525 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 SCUBE3Q8IX30 993 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 MMGT1Q8N4V1 131 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
VAPB-204ENST00000475243 PPP1R13LQ8WUF5 828 aa11.28□□□□□ -0.6
VAPB-204ENST00000475243 TUT1Q9H6E5 874 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms