RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 PIGVQ9NUD9 493 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ZNF446Q9NWS9 450 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 MTMR10Q9NXD2 777 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SAE1Q9UBE0 346 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 UNC80Q8N2C7 3258 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 TTI1O43156 1089 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 EFCAB14O75071 495 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 CAPN15O75808 1086 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 RNF8O76064 485 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FBXO21O94952 628 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SEC24AO95486 1093 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 LTFP02788 710 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SOD2P04179 222 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ATF6P18850 670 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 OR1D2P34982 312 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 PTGIRP43119 386 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SNX16P57768 344 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 IFRD2Q12894 506 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 DUSP4Q13115 394 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 PPIGQ13427 754 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 EIF4EBP2Q13542 120 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 NFE2Q16621 373 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 USP41Q3LFD5 358 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FAM182AQ5T1J6 154 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 BSPRYQ5W0U4 402 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FAM109BQ6ICB4 259 aaPredicted RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SCYL2Q6P3W7 929 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ANKS3Q6ZW76 656 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 FAM131BQ86XD5 332 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 CCDC50Q8IVM0 306 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 GSPT2Q8IYD1 628 aaKnown RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 RCOR2Q8IZ40 523 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 DCP1BQ8IZD4 617 aaKnown RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SCML4Q8N228 414 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 PYROXD2Q8N2H3 581 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 HSPH1Q92598 858 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ZNF558Q96NG5 402 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 POPDC2Q9HBU9 364 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 WDR6Q9NNW5 1121 aaKnown RBP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 IL37Q9NZH6 218 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 LCMT1Q9UIC8 334 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 NUDT5Q9UKK9 219 aa8.7□□□□□ -1.02
GTF3A-206ENST00000470606 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
GTF3A-206ENST00000470606 ANAPC1Q9H1A4 1944 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 CCDC188H7C350 402 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 LILRB3O75022 631 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 KRT7P08729 469 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 CPB1P15086 417 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 NOS2P35228 1153 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 PTPN7P35236 360 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 MAGEA11P43364 429 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 DSG1Q02413 1049 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 DPYSL3Q14195 570 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 PSMD5Q16401 504 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 TFDP3Q5H9I0 405 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 SPOUT1Q5T280 376 aaKnown RBP8.69□□□□□ -1.02
GTF3A-206ENST00000470606 ARTNQ5T4W7 220 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 KAZNQ674X7 775 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 C8orf74Q6P047 294 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 WDR93Q6P2C0 686 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 VSTM1Q6UX27 236 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
GTF3A-206ENST00000470606 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
GTF3A-206ENST00000470606 C8orf48Q96LL4 319 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 TRIM51Q9BSJ1 452 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 PCDHB5Q9Y5E4 795 aa8.69□□□□□ -1.02
GTF3A-206ENST00000470606 MYO18AQ92614 2054 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 SYNJ2BP-COX16A0A087WUM0 186 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 FAM92AA1XBS5 289 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 TARSL2A2RTX5 802 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 M0QYT0 321 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 TP73O15350 636 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 PRPSAP2O60256 369 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 PHF2O75151 1096 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 ABLIM3O94929 683 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 SEC31AO94979 1220 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 HEXIM1O94992 359 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 HAPLN1P10915 354 aaPredicted RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 NCAM1P13591 858 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 MYOGP15173 224 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 DNAJB2P25686 324 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 ECHS1P30084 290 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 L1CAMP32004 1257 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 SULT1E1P49888 294 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 RBM10P98175 930 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 NME3Q13232 169 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 SNX1Q13596 522 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 SMC1AQ14683 1233 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 C9orf50Q5SZB4 431 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 RASIP1Q5U651 963 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 STRADAQ7RTN6 431 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 DDX53Q86TM3 631 aaKnown RBP8.68□□□□□ -1.02
GTF3A-206ENST00000470606 PRUNE1Q86TP1 453 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 HERC6Q8IVU3 1022 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
GTF3A-206ENST00000470606 PQLC3Q8N755 202 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms