RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 DHRS4Q9BTZ2 278 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 G6PC3Q9BUM1 346 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 NOL6Q9H6R4 1146 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 HEBP1Q9NRV9 189 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 VPS45Q9NRW7 570 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 NRBP2Q9NSY0 501 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 AGPAT5Q9NUQ2 364 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 MARCH5Q9NX47 278 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 GFOD1Q9NXC2 390 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 CGGBP1Q9UFW8 167 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 KCNG1Q9UIX4 513 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 FBXW11Q9UKB1 542 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 NAP1L2Q9ULW6 460 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 PIN4Q9Y237 131 aaKnown RBP6.03□□□□□ -1.44
PTCD3-207ENST00000467273 MYRFQ9Y2G1 1151 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 EMC9Q9Y3B6 208 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 NEUROG3Q9Y4Z2 214 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 PCDHB2Q9Y5E7 798 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 COL4A3Q01955 1670 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 ZMYM2Q9UBW7 1377 aa6.03□□□□□ -1.44
PTCD3-207ENST00000467273 COL4A2P08572 1712 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 WDR81Q562E7 1941 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 K7ESF4 209 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 IFIT3O14879 490 aaKnown RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PRODHO43272 600 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PRICKLE3O43900 615 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 DNAJC6O75061 913 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 KCNH1O95259 989 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 CHRNB1P11230 501 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 SDSP20132 328 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PAX3P23760 479 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 NOVA1P51513 510 aaKnown RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 MYBPC2Q14324 1141 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PCBP1Q15365 356 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 SF3A2Q15428 464 aaKnown RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PPM1LQ5SGD2 360 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 CYB5R4Q7L1T6 521 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 CACNA2D4Q7Z3S7 1137 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PALB2Q86YC2 1186 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 TRIM59Q8IWR1 403 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 COLGALT2Q8IYK4 626 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 SYNPOQ8N3V7 929 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 LRRC71Q8N4P6 559 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 BTN2A2Q8WVV5 523 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 FAM3CQ92520 227 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 ZC3H10Q96K80 434 aaKnown RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 KXD1Q9BQD3 176 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 JPH2Q9BR39 696 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 COLEC11Q9BWP8 271 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 ARRDC1-AS1Q9H2J1 176 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 LMAN1LQ9HAT1 526 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 MRPS23Q9Y3D9 190 aaKnown RBP6.02□□□□□ -1.45
PTCD3-207ENST00000467273 PRKAB1Q9Y478 270 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 LAMA5O15230 3695 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 F5P12259 2224 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 SPAG17Q6Q759 2223 aa6.02□□□□□ -1.45
PTCD3-207ENST00000467273 SF3B1O75533 1304 aaKnown RBP eCLIP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 IGKV6-21A0A0C4DH24 114 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 hCG_1984214I3L0E3 225 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 K7ESM1 405 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 AKAP8O43823 692 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CYP3A4P08684 503 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SPATA31D3P0C874 917 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CALM1P0DP23 149 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CALM2P0DP24 149 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CALM3P0DP25 149 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 PABPC1P11940 636 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 FGFR4P22455 802 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SFNP31947 248 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 OR1G1P47890 313 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 MASP1P48740 699 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 FNTBP49356 437 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SATB1Q01826 763 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 TARBP2Q15633 366 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SF1Q15637 639 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 UBE2SQ16763 222 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 PABPC1LQ4VXU2 614 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SOWAHCQ53LP3 525 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 DGKKQ5KSL6 1271 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SPATA31D4Q6ZUB0 917 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 TAS1R1Q7RTX1 841 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CATSPER4Q7RTX7 472 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 RALYLQ86SE5 291 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SCUBE1Q8IWY4 988 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 ZNF713Q8N859 430 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 ITFG1Q8TB96 612 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 DEPDC1BQ8WUY9 529 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 GAB3Q8WWW8 586 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 PIBF1Q8WXW3 757 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 E2F7Q96AV8 911 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 CCDC51Q96ER9 411 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 TRMT61BQ9BVS5 477 aaKnown RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 SCNM1Q9BWG6 230 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 BRINP2Q9C0B6 783 aa6.01□□□□□ -1.45
PTCD3-207ENST00000467273 ZNF334Q9HCZ1 680 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-207ENST00000467273 RIC8AQ9NPQ8 531 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms