RNA–Protein interactions for RNA: ENST00000466124.1

PRKCB-204, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-204ENST00000466124 LIG4P49917 911 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 GAD2Q05329 585 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 NNTQ13423 1086 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 HLA-BQ31612 363 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 SV2CQ496J9 727 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 PREPLQ4J6C6 727 aaPredicted RBP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 C10orf76Q5T2E6 689 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 LRRC69Q6ZNQ3 347 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 DDX42Q86XP3 938 aaKnown RBP eCLIP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 CYP4X1Q8N118 509 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 PDCL2Q8N4E4 241 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 ZCCHC9Q8N567 271 aaKnown RBP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 IGSF22Q8N9C0 903 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 CADM4Q8NFZ8 388 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 RHBDD1Q8TEB9 315 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 SNX29Q8TEQ0 813 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 IPO4Q8TEX9 1081 aaKnown RBP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 BICD1Q96G01 975 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 WBP1Q96G27 269 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 SPATA17Q96L03 361 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 MRGPRX1Q96LB2 322 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 CEP295NLQ96MC4 621 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 GABRG3Q99928 467 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 DUSP9Q99956 384 aaKnown RBP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 TTLL2Q9BWV7 592 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 DPP3Q9NY33 737 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 WSB2Q9NYS7 404 aaPredicted RBP5.86□□□□□ -1.47
PRKCB-204ENST00000466124 TBC1D14Q9P2M4 693 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 LRWD1Q9UFC0 647 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 L1RE1Q9UN81 338 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 BTBD3Q9Y2F9 522 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 CPQQ9Y646 472 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 BSNQ9UPA5 3926 aa5.86□□□□□ -1.47
PRKCB-204ENST00000466124 E2F8A0AVK6 867 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 ZNF840PA6NDX5 716 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 HNRNPDLO14979 420 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PCDHGA12O60330 932 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 TULP3O75386 442 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 REC8O95072 547 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 OAS1P00973 400 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 NCAM1P13591 858 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SCP2P22307 547 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PNPLA4P41247 253 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 WASP42768 502 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PPP3CCP48454 512 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 MYL7Q01449 175 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 POU5F1Q01860 360 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SRSF1Q07955 248 aaKnown RBP eCLIP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 MYO1EQ12965 1108 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 RTP5Q14D33 572 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SUZ12Q15022 739 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 ZNF174Q15697 407 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 CCDC142Q17RM4 750 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PPP1R26Q5T8A7 1209 aaPredicted RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 EGFLAMQ63HQ2 1017 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SLC39A4Q6P5W5 647 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 FAM171BQ6P995 826 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 DHRS13Q6UX07 377 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 VSTM1Q6UX27 236 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 KCNK18Q7Z418 384 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 OSTM1Q86WC4 334 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SKAP1Q86WV1 359 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SPATA2LQ8IUW3 424 aaPredicted RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 SCN4BQ8IWT1 228 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 CCDC116Q8IYX3 515 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 C4orf32Q8N8J7 132 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 C1orf216Q8TAB5 229 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 OTUB2Q96DC9 234 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 ZNF560Q96MR9 790 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 HNRNPABQ99729 332 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 MSTO1Q9BUK6 570 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 NRSN2Q9GZP1 204 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 RNF38Q9H0F5 515 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 CYLDQ9NQC7 956 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 IGSF5Q9NSI5 407 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PDRG1Q9NUG6 133 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 DDX43Q9NXZ2 648 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 TRPM5Q9NZQ8 1165 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 USP36Q9P275 1121 aaKnown RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 CFAP97Q9P2B7 532 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 DEC1Q9P2X7 70 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 DNMT3LQ9UJW3 386 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 GTF3C4Q9UKN8 822 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 PCDHGA1Q9Y5H4 931 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 WASF2Q9Y6W5 498 aa5.85□□□□□ -1.47
PRKCB-204ENST00000466124 COL5A1P20908 1838 aaPredicted RBP5.85□□□□□ -1.47
PRKCB-204ENST00000466124 METTL12A8MUP2 240 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 B8ZZF3 427 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 GFRA2O00451 464 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 GABRDO14764 452 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 SCAMP3O14828 347 aaKnown RBP5.84□□□□□ -1.47
PRKCB-204ENST00000466124 BCAT2O15382 392 aaPredicted RBP5.84□□□□□ -1.47
PRKCB-204ENST00000466124 PAPSS1O43252 624 aaPredicted RBP5.84□□□□□ -1.47
PRKCB-204ENST00000466124 HUS1O60921 280 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 WISP1O95388 367 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 ACAT1P24752 427 aaKnown RBP5.84□□□□□ -1.47
PRKCB-204ENST00000466124 PCSK1P29120 753 aa5.84□□□□□ -1.47
PRKCB-204ENST00000466124 HNF1BP35680 557 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms