RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 ANKS1AQ92625 1134 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 QKIQ96PU8 341 aaKnown RBP eCLIP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PABPC3Q9H361 631 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ANKEF1Q9NU02 776 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 RNF181Q9P0P0 153 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 RABGEF1Q9UJ41 708 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 AFF2P51816 1311 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 MYL12BO14950 172 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TPBGLP0DKB5 382 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CYP2C9P11712 490 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CCNG1P51959 295 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PRKAA2P54646 552 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 OVGP1Q12889 678 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 UTP15Q8TED0 518 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 DPF2Q92785 391 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 RIT2Q99578 217 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 FAM118BQ9BPY3 351 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CELF4Q9BZC1 486 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 REXO4Q9GZR2 422 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 KLHL1Q9NR64 748 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CHST12Q9NRB3 414 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 VPS51Q9UID3 782 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 DNAJC16Q9Y2G8 782 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 SMIM22K7EJ46 135 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ZW10O43264 779 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PLA2G6O60733 806 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NPTXRO95502 500 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ABCB1P08183 1280 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TKTP29401 623 aaKnown RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 HALP42357 657 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 HNMTP50135 292 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CPT1AP50416 773 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF543Q08ER8 600 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 TRIM32Q13049 653 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NDUFAF6Q330K2 333 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 NECAB2Q7Z6G3 386 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 FBXO36Q8NEA4 188 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ADGRE3Q9BY15 652 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 SHCBP1LQ9BZQ2 653 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ZFYVE28Q9HCC9 887 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 PDGFCQ9NRA1 345 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 DDIT4Q9NX09 232 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 SH3BP4Q9P0V3 963 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 HAO1Q9UJM8 370 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CDK12Q9NYV4 1490 aaPredicted RBP9.26□□□□□ -0.93
BRCA1-205ENST00000461221 ERBB3P21860 1342 aa9.26□□□□□ -0.93
BRCA1-205ENST00000461221 CCDC189A1A4V9 331 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 IFRD1O00458 451 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PHGDHO43175 533 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SEC24CP53992 1094 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SNAPC2Q13487 334 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 BAATQ14032 418 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PLCL1Q15111 1095 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TAF1CQ15572 869 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MZT2AQ6P582 158 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SP8Q8IXZ3 490 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 HNRNPLLQ8WVV9 542 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 STARD8Q92502 1023 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 REPS1Q96D71 796 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CATSPER2Q96P56 530 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 C6orf62Q9GZU0 229 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 C17orf75Q9HAS0 396 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 AGPAT5Q9NUQ2 364 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TBC1D13Q9NVG8 400 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ADPRHL2Q9NX46 363 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ARHGAP28Q9P2N2 729 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM94Q12767 1356 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 GLP2RO95838 553 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CYP2A7P20853 494 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 KCNT1Q5JUK3 1230 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CYP4A22Q5TCH4 519 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 HLA-DQA1Q5Y7H0 255 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 EFCAB12Q6NXP0 572 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 HERC6Q8IVU3 1022 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SRBD1Q8N5C6 995 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MDM1Q8TC05 714 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TRAPPC9Q96Q05 1148 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TMEM120AQ9BXJ8 343 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 DPY30Q9C005 99 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 ZNF624Q9P2J8 865 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 CHORDC1Q9UHD1 332 aaPredicted RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 AP3M1Q9Y2T2 418 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 USP6P35125 1406 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TRIM66O15016 1216 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 UBDO15205 165 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 VPS4BO75351 444 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SMNDC1O75940 238 aaKnown RBP eCLIP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 FBXO21O94952 628 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TNNI3P19429 210 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PTPN3P26045 913 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 PTPN4P29074 926 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 DSG3P32926 999 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 TRAF3Q13114 568 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MAPK7Q13164 816 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SPANXN2Q5MJ10 180 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MRPS31Q92665 395 aaKnown RBP9.25□□□□□ -0.93
BRCA1-205ENST00000461221 MCRS1Q96EZ8 462 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 UGT2B28Q9BY64 529 aa9.25□□□□□ -0.93
BRCA1-205ENST00000461221 NYAP2Q9P242 653 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms