RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 CSMD2Q7Z408 3487 aa15.2■□□□□ 0.02
SYNCRIP-203ENST00000444272 A0A1W2PNU3 283 aaPredicted RBP15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 VPS37CA5D8V6 355 aaPredicted RBP15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 CCER2I3L3R5 266 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 CHMLP26374 656 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 RCAN1P53805 252 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 SRSF6Q13247 344 aaKnown RBP15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 NFE2Q16621 373 aaPredicted RBP15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 SFMBT2Q5VUG0 894 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 WSCD1Q658N2 575 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 ZC3H18Q86VM9 953 aaKnown RBP15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 SLC6A18Q96N87 628 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 ORAI3Q9BRQ5 295 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 SH3GLB2Q9NR46 395 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 AKAP9Q99996 3911 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 SCN1AP35498 2009 aa15.19■□□□□ 0.02
SYNCRIP-203ENST00000444272 MYH10P35580 1976 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 CDRT15L2A8MXV6 281 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 CYB561D2O14569 222 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 CYP26A1O43174 497 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 XPOTO43592 962 aaKnown RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 OPA1O60313 960 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 TSPAN3O60637 253 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 BAG4O95429 457 aaKnown RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 GCFC2P16383 781 aaKnown RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 CYP11B2P19099 503 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 ARRB1P49407 418 aaPredicted RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 COPAP53621 1224 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 TSPY1Q01534 308 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 NEK8Q86SG6 692 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 SCN4BQ8IWT1 228 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 SLFN12Q8IYM2 578 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 SSC4DQ8WTU2 575 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 OTUB2Q96DC9 234 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 PYM1Q9BRP8 204 aaKnown RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 PLEKHA5Q9HAU0 1116 aa15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
SYNCRIP-203ENST00000444272 TTC26A0AVF1 554 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 SYNCRIPO60506 623 aaKnown RBP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 SEMA4FO95754 770 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 OLFM2O95897 454 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 ABL1P00519 1130 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 WNT1P04628 370 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 BCAT1P54687 386 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 RACK1P63244 317 aaKnown RBP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 DAB2P98082 770 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 NOLC1Q14978 699 aaKnown RBP eCLIP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 FOXR1Q6PIV2 292 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 TAS1R3Q7RTX0 852 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 ATCAYQ86WG3 371 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 DDX42Q86XP3 938 aaKnown RBP eCLIP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 LEO1Q8WVC0 666 aaPredicted RBP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 POM121Q96HA1 1249 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 RNF26Q9BY78 433 aaPredicted RBP15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 GDF3Q9NR23 364 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 ANAPC2Q9UJX6 822 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 HIVEP1P15822 2718 aa15.17■□□□□ 0.02
SYNCRIP-203ENST00000444272 CKAP5Q14008 2032 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 PMS2P1A4D2B8 440 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 CCDC169A6NNP5 214 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 NEDD8-MDP1E9PL57 170 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 RNF224P0DH78 156 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 MBL2P11226 248 aaPredicted RBP15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 PAX3P23760 479 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 OXCT1P55809 520 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 EXOSC10Q01780 885 aaKnown RBP15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 PPP2R3AQ06190 1150 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 C9orf57Q5W0N0 161 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 BBS7Q8IWZ6 715 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 MIB2Q96AX9 1013 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 SKA1Q96BD8 255 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 PRR11Q96HE9 360 aaPredicted RBP15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 XPO6Q96QU8 1125 aaKnown RBP15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 TRIM9Q9C026 710 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 ABCB6Q9NP58 842 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 PCDHA12Q9UN75 941 aa15.16■□□□□ 0.02
SYNCRIP-203ENST00000444272 ZNF840PA6NDX5 716 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 LACTBL1A8MY62 500 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 SIGLEC6O43699 453 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 ZNF132P52740 706 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 USP46P62068 366 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 CYP4F2P78329 520 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 HDAC1Q13547 482 aaPredicted RBP15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 NPY5RQ15761 445 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 CCDC142Q17RM4 750 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 FHL5Q5TD97 284 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 SPATA1Q5VX52 437 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 CREB3L3Q68CJ9 461 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 OSBPL2Q9H1P3 480 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 TJP2Q9UDY2 1190 aa15.15■□□□□ 0.02
SYNCRIP-203ENST00000444272 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 PIRO00625 290 aa15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 CACNG3O60359 315 aa15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 OAS1P00973 400 aaKnown RBP15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 DGKGP49619 791 aa15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 PDIA5Q14554 519 aa15.14■□□□□ 0.01
SYNCRIP-203ENST00000444272 NTRK3Q16288 839 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms