RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RBP3P10745 1247 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 SELPP16109 830 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 PECAM1P16284 738 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 STIP1P31948 543 aaKnown RBP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 ACTN2P35609 894 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 CHKAP35790 457 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 TKTL1P51854 596 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 YWHAZP63104 245 aaKnown RBP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 ANKRD20A8PQ5CZ79 823 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 RAB41Q5JT25 222 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 SH3PXD2AQ5TCZ1 1133 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 KCTD16Q68DU8 428 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 MFSD5Q6N075 450 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 DCLRE1AQ6PJP8 1040 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 C4orf22Q6V702 233 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 PAQR9Q6ZVX9 377 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 PPIL6Q8IXY8 311 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 THEM5Q8N1Q8 247 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 CAPS2Q9BXY5 557 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 CENPHQ9H3R5 247 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 SEMA4AQ9H3S1 761 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 CNOT10Q9H9A5 744 aaKnown RBP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 PPCSQ9HAB8 311 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 DMAP1Q9NPF5 467 aaPredicted RBP13.72□□□□□ -0.21
CPSF4-206ENST00000441580 KANSL3Q9P2N6 904 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 PTPRDP23468 1912 aa13.72□□□□□ -0.21
CPSF4-206ENST00000441580 SRRM3A6NNA2 597 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 H3BRJ5 948 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 CLDN5O00501 218 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 RGS16O15492 202 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 CYP2F1P24903 491 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 ARL4AP40617 200 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NR2C2P49116 596 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 AFF1P51825 1210 aaKnown RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 ZNF135P52742 658 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 BCAR1P56945 870 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 MAP3K7CLP57077 242 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 DAOAP59103 153 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 DSC1Q08554 894 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 XRCC4Q13426 336 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 SLC29A2Q14542 456 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NOMO2Q5JPE7 1267 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 C6orf118Q5T5N4 469 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 KIAA0319Q5VV43 1072 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 OVOS1Q6IE37 1185 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 PPP1R21Q6ZMI0 780 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 CENPUQ71F23 418 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 BNIPLQ7Z465 357 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 DEFB106AQ8N104 65 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 RIBC1Q8N443 379 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 PRCCQ92733 491 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 APBB2Q92870 758 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NT5C3BQ969T7 300 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NTAN1Q96AB6 310 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 ZBTB9Q96C00 473 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 TLCD1Q96CP7 247 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 RTP4Q96DX8 246 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 SLC9A7Q96T83 725 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NPY6RQ99463 290 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 TRPV6Q9H1D0 765 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 DHX35Q9H5Z1 703 aaKnown RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 ELAC1Q9H777 363 aaKnown RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 CSNK1G1Q9HCP0 422 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 GPATCH2LQ9NWQ4 482 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 TMEM161AQ9NX61 479 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NINJ2Q9NZG7 142 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 PAK5Q9P286 719 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 CACNG4Q9UBN1 327 aa13.71□□□□□ -0.21
CPSF4-206ENST00000441580 FARP1Q9Y4F1 1045 aaPredicted RBP13.71□□□□□ -0.21
CPSF4-206ENST00000441580 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 BCLAF3A2AJT9 711 aaKnown RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 H7C0C1 242 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 RASGRF2O14827 1237 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 TCEA3O75764 348 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ZBED1O96006 694 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ATP5OP48047 213 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 VEGFBP49765 207 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ARL4CP56559 192 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 FAM189BP81408 668 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 MMRN1Q13201 1228 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 CCDC142Q17RM4 750 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ZC3H12AQ5D1E8 599 aaKnown RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 FAM171BQ6P995 826 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 BZW1Q7L1Q6 419 aaKnown RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 PQLC3Q8N755 202 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 PLD5Q8N7P1 536 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 LINC01599Q8WXQ3 324 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 SERPINB12Q96P63 405 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.22
CPSF4-206ENST00000441580 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 SMOQ99835 787 aa13.7□□□□□ -0.22
CPSF4-206ENST00000441580 CCDC77Q9BR77 488 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms