RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CACNB2Q08289 660 aaPredicted RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 TMEM62Q0P6H9 643 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 SBK1Q52WX2 424 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 FBXO47Q5MNV8 452 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 BORAQ6PGQ7 559 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 RAB11FIP4Q86YS3 637 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 HDAC2Q92769 488 aaKnown RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 SYAP1Q96A49 352 aaPredicted RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 PYM1Q9BRP8 204 aaKnown RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 MAGEB5Q9BZ81 275 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 UBN1Q9NPG3 1134 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 RIC8AQ9NPQ8 531 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 JADE2Q9NQC1 790 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 BLOC1S4Q9NUP1 217 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 CLIC5Q9NZA1 410 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 ORC3Q9UBD5 711 aaPredicted RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 ARPP21Q9UBL0 812 aaPredicted RBP6.96□□□□□ -1.3
SPEN-202ENST00000438066 CROTQ9UKG9 612 aa6.96□□□□□ -1.3
SPEN-202ENST00000438066 MYH8P13535 1937 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 SNED1Q8TER0 1413 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 KIF13BQ9NQT8 1826 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 CPLX1O14810 134 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 GRM6O15303 877 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 RANBP6O60518 1105 aaKnown RBP6.95□□□□□ -1.3
SPEN-202ENST00000438066 CDKL5O76039 1030 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 ELF1P32519 619 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 ALDH1A3P47895 512 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 TUBP50607 506 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 GSTO1P78417 241 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 LMBRD2Q68DH5 695 aaPredicted RBP6.95□□□□□ -1.3
SPEN-202ENST00000438066 SLC15A4Q8N697 577 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 CCDC150Q8NCX0 1101 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 SIMC1Q8NDZ2 872 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 OR56A3Q8NH54 315 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 ESR2Q92731 530 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 PANK2Q9BZ23 570 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 C11orf54Q9H0W9 315 aaPredicted RBP6.95□□□□□ -1.3
SPEN-202ENST00000438066 SEMA6BQ9H3T3 888 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 ZDHHC8Q9ULC8 765 aa6.95□□□□□ -1.3
SPEN-202ENST00000438066 GAKO14976 1311 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 ITIH6Q6UXX5 1313 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 A0A0B4J269 797 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 SYCE3A1L190 88 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 A6NLC8 198 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 ASNA1O43681 348 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 RASSF9O75901 435 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 GASTP01350 101 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 PRNPP04156 253 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CYP2C8P10632 490 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 RXRAP19793 462 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 GABRB3P28472 473 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 ITGA1P56199 1179 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 WNT3AP56704 352 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 WTAPQ15007 396 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 PLCL1Q15111 1095 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 FAM110CQ1W6H9 321 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 NKAPLQ5M9Q1 402 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 PRAMEF14Q5SWL7 426 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CCDC183Q5T5S1 534 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 ATL3Q6DD88 541 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 NFXL1Q6ZNB6 911 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 USP49Q70CQ1 688 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 PLXDC1Q8IUK5 500 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 TBC1D22AQ8WUA7 517 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CASKIN2Q8WXE0 1202 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CPA5Q8WXQ8 436 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 ERP27Q96DN0 273 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 MASTLQ96GX5 879 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CLIC6Q96NY7 704 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 MYOCQ99972 504 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 UBAC1Q9BSL1 405 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 KATNAL1Q9BW62 490 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 DHX36Q9H2U1 1008 aaKnown RBP6.94□□□□□ -1.3
SPEN-202ENST00000438066 WASH6PQ9NQA3 447 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 NECTIN3Q9NQS3 549 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 PAK6Q9NQU5 681 aaPredicted RBP6.94□□□□□ -1.3
SPEN-202ENST00000438066 RGL1Q9NZL6 768 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 POLG2Q9UHN1 485 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 FBXO10Q9UK96 956 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 CTNND2Q9UQB3 1225 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 SLC45A1Q9Y2W3 748 aa6.94□□□□□ -1.3
SPEN-202ENST00000438066 GPR75-ASB3A0A0A6YYF3 556 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 OR14I1A6ND48 311 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 HMX3A6NHT5 357 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CCDC69A6NI79 296 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 PRSS29PA6NIE9 313 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 BAIAP3O94812 1187 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 CYP2D6P10635 497 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 NCAM1P13591 858 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 IFNAR1P17181 557 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 XBP1P17861 261 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 ALDH1B1P30837 517 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 NT5C2P49902 561 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 GUCY1B3Q02153 619 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 ADAM15Q13444 863 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 SLC15A2Q16348 729 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 MFSD14BQ5SR56 506 aa6.93□□□□□ -1.3
SPEN-202ENST00000438066 GPATCH4Q5T3I0 446 aaKnown RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms