RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 U2AF1Q01081 240 aaKnown RBP eCLIP4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 LARS2Q15031 903 aaKnown RBP4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 TMTC4Q5T4D3 741 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 RANBP10Q6VN20 620 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 DCDC5Q6ZRR9 648 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 RNF152Q8N8N0 203 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 DENND1AQ8TEH3 1009 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 PHKBQ93100 1093 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 TCEAL9Q9UHQ7 104 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 HPSEQ9Y251 543 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 AFG3L2Q9Y4W6 797 aa4.04□□□□□ -1.76
TIMM9P3-201ENST00000428659 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 RRHO14718 337 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 NTN1O95631 604 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 THBS4P35443 961 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 PBX1P40424 430 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 SUMO2P61956 95 aaKnown RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 FAM193AP78312 1265 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 ZNF543Q08ER8 600 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 GAB1Q13480 694 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 ZNF268Q14587 947 aaPredicted RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 MFSD13AQ14CX5 517 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 GFOD2Q3B7J2 385 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 AWAT2Q6E213 333 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 TMEM65Q6PI78 240 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 TFAP2DQ7Z6R9 452 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 LIX1LQ8IVB5 337 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 C12orf76Q8N812 135 aaPredicted RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 COQ8BQ96D53 544 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 USP29Q9HBJ7 922 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 AGO4Q9HCK5 861 aaKnown RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 DDX21Q9NR30 783 aaKnown RBP eCLIP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 TRNAU1APQ9NX07 287 aaKnown RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 GAR1Q9NY12 217 aaKnown RBP4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 MTMR4Q9NYA4 1195 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 TFCP2L1Q9NZI6 479 aa4.03□□□□□ -1.76
TIMM9P3-201ENST00000428659 TMEM232C9JQI7 657 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 UBE2Q2LH0YL09 131 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 KPNA5O15131 536 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 CBFA2T3O75081 653 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 ARP10275 920 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 PRF1P14222 555 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 ATF3P18847 181 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 ATICP31939 592 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 LINC00205P59089 165 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 CFHR3Q02985 330 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 CFHR1Q03591 330 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 TRIP6Q15654 476 aaKnown RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 CERKLQ49MI3 558 aaPredicted RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 TECPR1Q7Z6L1 1165 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 RAB11FIP4Q86YS3 637 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 NANOGP1Q8N7R0 232 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 SUN3Q8TAQ9 357 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 OSR1Q8TAX0 266 aaPredicted RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 CAMK1GQ96NX5 476 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 FCRL4Q96PJ5 515 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 PUS7Q96PZ0 661 aaKnown RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 FYTTD1Q96QD9 318 aaKnown RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 SIGLEC11Q96RL6 698 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 TM2D2Q9BX73 214 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 SEMA5BQ9P283 1151 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 DNAJB11Q9UBS4 358 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 ZNF212Q9UDV6 495 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 RGS17Q9UGC6 210 aaPredicted RBP4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 FZD4Q9ULV1 537 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 COL15A1P39059 1388 aa4.02□□□□□ -1.77
TIMM9P3-201ENST00000428659 KRTAP29-1A8MX34 341 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 BTBD19C9JJ37 291 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 PQBP1O60828 265 aaKnown RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 USP1O94782 785 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 GALNSP34059 522 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 MMP13P45452 471 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 KRTAP10-9P60411 292 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 EIF4A1P60842 406 aaKnown RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 ZNF91Q05481 1191 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 RBMS2Q15434 407 aaKnown RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 AASDHQ4L235 1098 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 SHC4Q6S5L8 630 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 CRTC1Q6UUV9 634 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 YAF2Q8IY57 180 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 ZNF548Q8NEK5 533 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 FAM227BQ96M60 508 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 GDF15Q99988 308 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 GATA5Q9BWX5 397 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 BRIP1Q9BX63 1249 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 TUBA8Q9NY65 449 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 NKX1-2Q9UD57 310 aaPredicted RBP4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 VPS4AQ9UN37 437 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 FAM50BQ9Y247 325 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 PCDHB2Q9Y5E7 798 aa4.01□□□□□ -1.77
TIMM9P3-201ENST00000428659 LY6G6EA0A0G2JKS1 128 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 A8MVJ9 347 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 M0QZQ0 153 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 M0R3H8 397 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 APAF1O14727 1248 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 TMPRSS11DO60235 418 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 MARCH6O60337 910 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 MGEA5O60502 916 aa4□□□□□ -1.77
TIMM9P3-201ENST00000428659 PARNO95453 639 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms