RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 ZFHX2Q9C0A1 2572 aaPredicted RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 BECN2A8MW95 431 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 P4HA2O15460 535 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 LMNAP02545 664 aaKnown RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 HMBSP08397 361 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 ATP5C1P36542 298 aaKnown RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 RGS7P49802 495 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 CCR3P51677 355 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 SEC13P55735 322 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 LPAL2Q16609 132 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 STX1AQ16623 288 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 SKOR2Q2VWA4 1001 aaPredicted RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 C10orf120Q5SQS8 335 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 PM20D1Q6GTS8 502 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 C1orf228Q6PIY5 440 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 LCLAT1Q6UWP7 414 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 HTR3DQ70Z44 454 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 TTC39CQ8N584 583 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 RBBP8NLQ8NC74 664 aaPredicted RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 CLEC4CQ8WTT0 213 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 SLC35F5Q8WV83 523 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 FUCA2Q9BTY2 467 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 SIX2Q9NPC8 291 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 UBE2TQ9NPD8 197 aaPredicted RBP13.4□□□□□ -0.26
GPC1-204ENST00000426280 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 DACH1Q9UI36 760 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 CNTN6Q9UQ52 1028 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 SH3BP1Q9Y3L3 701 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 MYO16Q9Y6X6 1858 aa13.4□□□□□ -0.26
GPC1-204ENST00000426280 MYH10P35580 1976 aa13.4□□□□□ -0.27
GPC1-204ENST00000426280 ATG2BQ96BY7 2078 aa13.4□□□□□ -0.27
GPC1-204ENST00000426280 MYOFQ9NZM1 2061 aa13.4□□□□□ -0.27
GPC1-204ENST00000426280 YJEFN3A6XGL0 299 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 E7ENQ6 273 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 XPO1O14980 1071 aaKnown RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 STC2O76061 302 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 PAPSS2O95340 614 aaPredicted RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 NFATC1O95644 943 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 GNA14O95837 355 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 CCDC192P0DO97 292 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 DRD1P21728 446 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 TBXAS1P24557 533 aaPredicted RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 ERCC5P28715 1186 aaPredicted RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 EFEMP1Q12805 493 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 CNGA2Q16280 664 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 DENND1BQ6P3S1 775 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 Q6ZNB5 142 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 MIB1Q86YT6 1006 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 ETFBKMTQ8IXQ9 262 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 SYNPOQ8N3V7 929 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 ZNF276Q8N554 614 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 CCDC33Q8N5R6 958 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 RPLP0P6Q8NHW5 317 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 USP33Q8TEY7 942 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 ATRIPQ8WXE1 791 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 NACA2Q9H009 215 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 SAMSN1Q9NSI8 373 aaKnown RBP13.39□□□□□ -0.27
GPC1-204ENST00000426280 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.39□□□□□ -0.27
GPC1-204ENST00000426280 PCDHGA2Q9Y5H1 932 aa13.39□□□□□ -0.27
GPC1-204ENST00000426280 ZBED1O96006 694 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 PAEPP09466 180 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 PNMA6AP0CW24 399 aaPredicted RBP13.38□□□□□ -0.27
GPC1-204ENST00000426280 ADH5P11766 374 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 LCP1P13796 627 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 PON1P27169 355 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 PLA2G4AP47712 749 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 YWHAGP61981 247 aaKnown RBP eCLIP13.38□□□□□ -0.27
GPC1-204ENST00000426280 GCNT1Q02742 428 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 KDSRQ06136 332 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 ADIGQ0VDE8 80 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 BST2Q10589 180 aaKnown RBP13.38□□□□□ -0.27
GPC1-204ENST00000426280 KCNMA1Q12791 1236 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 NR1H3Q13133 447 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
GPC1-204ENST00000426280 ZSCAN23Q3MJ62 389 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 ANO6Q4KMQ2 910 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 C2orf27AQ580R0 203 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 MIIPQ5JXC2 388 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 KIAA1958Q8N8K9 716 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 EDEM1Q92611 657 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 HHIPQ96QV1 700 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 IER2Q9BTL4 223 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
GPC1-204ENST00000426280 SPHK2Q9NRA0 654 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 CLIC5Q9NZA1 410 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 TBC1D14Q9P2M4 693 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 SFMBT1Q9UHJ3 866 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 RASAL2Q9UJF2 1139 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 DNMT3LQ9UJW3 386 aa13.38□□□□□ -0.27
GPC1-204ENST00000426280 A0A0A0MRY4 1105 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 SLC9A3R1O14745 358 aaPredicted RBP13.37□□□□□ -0.27
GPC1-204ENST00000426280 TULP3O75386 442 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 FYNP06241 537 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 TGM1P22735 817 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 BCAT1P54687 386 aa13.37□□□□□ -0.27
GPC1-204ENST00000426280 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms