RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 EML1O00423 815 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 GABRR2P28476 465 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 SERPINA4P29622 427 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FUT10Q6P4F1 479 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TRAIPQ9BWF2 469 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 PRDM16Q9HAZ2 1276 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ZNF112Q9UJU3 913 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FGF10O15520 208 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 PRMT3O60678 531 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 DDX6P26196 483 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHD7-201ENST00000423902 GJA9P57773 515 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 CCDC137Q6PK04 289 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 KELP23276 732 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 HADHAP40939 763 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ERVK-21P61565 698 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 DHX9Q08211 1270 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 LBRQ14739 615 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 HSDL1Q3SXM5 330 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 SV2AQ7L0J3 742 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 SNX31Q8N9S9 440 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 MAGEC3Q8TD91 643 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 DRG1Q9Y295 367 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 PPFIA2O75334 1257 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ANP32DO95626 131 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ATP1A3P13637 1013 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 CYP3A5P20815 502 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ART3Q13508 389 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 GRM3Q14832 879 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 NTRK3Q16288 839 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 MRNIPQ6NTE8 343 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 LGI2Q8N0V4 545 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FAM172AQ8WUF8 416 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 OTUB1Q96FW1 271 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 RAD9AQ99638 391 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 VCX3BQ9H321 246 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 POLBP06746 335 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 RARGP13631 454 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FDPSP14324 419 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 TRADDQ15628 312 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 RARS2Q5T160 578 aaKnown RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 TRIM65Q6PJ69 517 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ZFP14Q9HCL3 533 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TUBP50607 506 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TFDP3Q5H9I0 405 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FAM96AQ9H5X1 160 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 COL2A1P02458 1487 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 ARF4P18085 180 aaPredicted RBP8.68□□□□□ -1.02
CHD7-201ENST00000423902 MSH3P20585 1137 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 SMTNL2Q2TAL5 461 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TRIM60Q495X7 471 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TRIM59Q8IWR1 403 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 ATP13A1Q9HD20 1204 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 FIS1Q9Y3D6 152 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 RIPK3Q9Y572 518 aa8.68□□□□□ -1.02
CHD7-201ENST00000423902 TTC26A0AVF1 554 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CCDC130P13994 396 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 HMOX2P30519 316 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 MAPK9P45984 424 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 MAPK8IP2Q13387 824 aaPredicted RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 TEKT4Q8WW24 435 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 NDEL1Q9GZM8 345 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 PMPCBO75439 489 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 SGPL1O95470 568 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 GTF2F1P35269 517 aaKnown RBP eCLIP8.67□□□□□ -1.022e-6■■■■□ 26.7
CHD7-201ENST00000423902 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 IRF5Q13568 498 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CCL14Q16627 93 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 GRAMD4Q6IC98 578 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 TPGS1Q6ZTW0 290 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 ACAD11Q709F0 780 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 NLRP9Q7RTR0 991 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CLPBQ9H078 707 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 VPS51Q9UID3 782 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 ATG13O75143 517 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 DHX34Q14147 1143 aaKnown RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 TMEM175Q9BSA9 504 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 TMEM161AQ9NX61 479 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 ATAD5Q96QE3 1844 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 LRRIQ3A6PVS8 624 aaPredicted RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 KCNA2P16389 499 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 TM4SF4P48230 202 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CACNA2D3Q8IZS8 1091 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 TIFAQ96CG3 184 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 AGXT2Q9BYV1 514 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 TSR3Q9UJK0 312 aaKnown RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 ACSL3O95573 720 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 PKN3Q6P5Z2 889 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 HDDC3Q8N4P3 179 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 SLC25A41Q8N5S1 370 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CFAP61Q8NHU2 1237 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 EDEM1Q92611 657 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 CNOT10Q9H9A5 744 aaKnown RBP8.67□□□□□ -1.02
CHD7-201ENST00000423902 CALCOCO1Q9P1Z2 691 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 SEPT3Q9UH03 358 aa8.67□□□□□ -1.02
CHD7-201ENST00000423902 XPO7Q9UIA9 1087 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms