RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 ACOX2Q99424 681 aa8.82□□□□□ -1
ABCA4-201ENST00000370225 MGAT4DA6NG13 374 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CCNT2O60583 730 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 USP17L7P0C7H9 530 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 ITGALP20701 1170 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MDH1P40925 334 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 GUCA1AP43080 201 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 CSHL1Q14406 222 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 BOLA3Q53S33 107 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MTSS1LQ765P7 747 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 LGI2Q8N0V4 545 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 RXFP2Q8WXD0 754 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 ERP27Q96DN0 273 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CNDP1Q96KN2 507 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 TRPC4Q9UBN4 977 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 N6AMT1Q9Y5N5 214 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 LRRIQ3A6PVS8 624 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 PRR23D1E9PI22 279 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 CRTAMO95727 393 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 PRR23D2P0DMB1 279 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 KRT20P35900 424 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 VGLL4Q14135 290 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 SLC29A2Q14542 456 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 NOL9Q5SY16 702 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 DET1Q7L5Y6 550 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 SCUBE3Q8IX30 993 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 SEMA4DQ92854 862 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 TATDN2Q93075 761 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 ZDHHC6Q9H6R6 413 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 SPG21Q9NZD8 308 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 GLP2RO95838 553 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MT-CO1P00395 513 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 PGK1P00558 417 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CDH2P19022 906 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 BDNFP23560 247 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CDH8P55286 799 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 BST2Q10589 180 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 MRPL28Q13084 256 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 SEMA3FQ13275 785 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 DGKZQ13574 1117 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CD302Q8IX05 232 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 GRIN3AQ8TCU5 1115 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 KCNF1Q9H3M0 494 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CAAP1Q9H8G2 361 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 DMAP1Q9NPF5 467 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 DDX28Q9NUL7 540 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 PPRC1Q5VV67 1664 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 KPNA6O60684 536 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MICAL2O94851 1124 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CYP2F1P24903 491 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 POU1F1P28069 291 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 WDR49Q8IV35 697 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MMGT1Q8N4V1 131 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CAMKK1Q8N5S9 505 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 PNPLA6Q8IY17 1366 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 PSTPIP1O43586 416 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 NUDT14O95848 222 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 AMPD2Q01433 879 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 IRAK1BP1Q5VVH5 260 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 ADAM2Q99965 735 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 DNAJC5Q9H3Z4 198 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 PPP2R3BQ9Y5P8 575 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 LACTBL1A8MY62 500 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 B2RBV5 119 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 KPNA3O00505 521 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 XPO1O14980 1071 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 NKRFO15226 690 aaKnown RBP eCLIP8.81□□□□□ -1
ABCA4-201ENST00000370225 ARHGEF9O43307 516 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CD44P16070 742 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 TUBP50607 506 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CCNG1P51959 295 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CXCL17Q6UXB2 119 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 BBS7Q8IWZ6 715 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 CENPLQ8N0S6 344 aaPredicted RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 GPC2Q8N158 579 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 ZNF473Q8WTR7 871 aaKnown RBP8.81□□□□□ -1
ABCA4-201ENST00000370225 CNBD2Q96M20 576 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 MKNK1Q9BUB5 465 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 KANSL3Q9P2N6 904 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 TSPAN16Q9UKR8 245 aa8.81□□□□□ -1
ABCA4-201ENST00000370225 O00370 1275 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 NDUFS2O75306 463 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 IL1R1P14778 569 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 Q4G0T1 1027 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 LRRC23Q53EV4 343 aaPredicted RBP8.8□□□□□ -1
ABCA4-201ENST00000370225 CCDC60Q8IWA6 550 aaPredicted RBP8.8□□□□□ -1
ABCA4-201ENST00000370225 ZFPM1Q8IX07 1006 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 USP38Q8NB14 1042 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 REPS2Q8NFH8 660 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 DNERQ8NFT8 737 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 XPO6Q96QU8 1125 aaKnown RBP8.8□□□□□ -1
ABCA4-201ENST00000370225 RHBGQ9H310 441 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 MSRAQ9UJ68 235 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 RNF103O00237 685 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 NR5A2O00482 541 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 TRDMT1O14717 391 aaKnown RBP8.8□□□□□ -1
ABCA4-201ENST00000370225 MLH1P40692 756 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 SERPINB4P48594 390 aa8.8□□□□□ -1
ABCA4-201ENST00000370225 CBWD3Q5JTY5 395 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms