RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 FMO1Q01740 532 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CYP27A1Q02318 531 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TFF2Q03403 129 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TWF1Q12792 350 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CLUL1Q15846 466 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 SLC5A9Q2M3M2 681 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 GOLGA7BQ2TAP0 167 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 FIGNQ5HY92 759 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 RARS2Q5T160 578 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 HGSNATQ68CP4 663 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 ALKBH2Q6NS38 261 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 WDR59Q6PJI9 974 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 LCLAT1Q6UWP7 414 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 BHLHA9Q7RTU4 235 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TMC6Q7Z403 805 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TMEM150AQ86TG1 271 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 PPFIBP1Q86W92 1011 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TMC8Q8IU68 726 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 WDTC1Q8N5D0 677 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 SMRP1Q8NCR6 262 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 MAFAQ8NHW3 353 aaPredicted RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 UBA3Q8TBC4 463 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 SPPL2BQ8TCT7 592 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 C2orf15Q8WU43 125 aaKnown RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 HDAC7Q8WUI4 952 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 ZNF606Q8WXB4 792 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 PPM1EQ8WY54 764 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CASP10Q92851 521 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 IRF7Q92985 503 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TCEAL4Q96EI5 215 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CYFIP2Q96F07 1278 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 FUBP3Q96I24 572 aaKnown RBP eCLIP6.24□□□□□ -1.41
SSX3-201ENST00000298396 TNIP3Q96KP6 325 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 KCNK16Q96T55 309 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 PCDHB18PQ96TA0 734 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 SEPT5Q99719 369 aaPredicted RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 APOL5Q9BWW9 433 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TRIM5Q9C035 493 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 UBE2ZQ9H832 354 aaPredicted RBP6.24□□□□□ -1.41
SSX3-201ENST00000298396 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CSNK1G1Q9HCP0 422 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CLDND1Q9NY35 253 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 HSFX1Q9UBD0 423 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TJP2Q9UDY2 1190 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 TSPAN16Q9UKR8 245 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 CAPN11Q9UMQ6 739 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 DAAM1Q9Y4D1 1078 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 KIAA1549LQ6ZVL6 1849 aa6.24□□□□□ -1.41
SSX3-201ENST00000298396 F5P12259 2224 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CCDC195A0A1B0GUA6 201 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 THAP12O43422 761 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CBFA2T2O43439 604 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 FZD6O60353 706 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 MFAP3LO75121 409 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ADCY5O95622 1261 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 MMEP08473 750 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 PLEKP08567 350 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 POU2F2P09086 479 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SKILP12757 684 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CD19P15391 556 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CYP11B1P15538 503 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TRIM21P19474 475 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 CDC25BP30305 580 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 HOXA9P31269 272 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 GPD2P43304 727 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 RPL34P49207 117 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 MAP3K7CLP57077 242 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ZBED6P86452 979 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ARID5AQ03989 594 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SMARCB1Q12824 385 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 BMS1Q14692 1282 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 MAPRE1Q15691 268 aaKnown RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 CNGA2Q16280 664 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 NFE2Q16621 373 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 MGAT5BQ3V5L5 792 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SGO2Q562F6 1265 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 RAB41Q5JT25 222 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 PRSS36Q5K4E3 855 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TAF3Q5VWG9 929 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SPECC1LQ69YQ0 1117 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 PMF1Q6P1K2 205 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 VSTM1Q6UX27 236 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TREML4Q6UXN2 200 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TMC5Q6UXY8 1006 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 C4orf50Q6ZRC1 276 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 GAREM2Q75VX8 874 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SND1Q7KZF4 910 aaKnown RBP eCLIP6.23□□□□□ -1.41
SSX3-201ENST00000298396 ZNF571Q7Z3V5 609 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 DNAAF5Q86Y56 855 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 SPATA2LQ8IUW3 424 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 PASD1Q8IV76 773 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TTC39CQ8N584 583 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 TC2NQ8N9U0 490 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 ANKRD52Q8NB46 1076 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CMASQ8NFW8 434 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 SCAMP5Q8TAC9 235 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.23□□□□□ -1.41
SSX3-201ENST00000298396 GIPC2Q8TF65 315 aa6.23□□□□□ -1.41
SSX3-201ENST00000298396 CPLX3Q8WVH0 158 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms