RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 NT5DC1Q5TFE4 455 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CD99L2Q8TCZ2 262 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 UBE2OQ9C0C9 1292 aaKnown RBP18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CLPBQ9H078 707 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 COL1A2P08123 1366 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 ATRNO75882 1429 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CAPN15O75808 1086 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 ADH1AP07327 375 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 C4orf33Q8N1A6 199 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CDT1Q9H211 546 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 SLC6A3Q01959 620 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 PRUNE1Q86TP1 453 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 ARHGEF19Q8IW93 802 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 DEFB106AQ8N104 65 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 TMEM161BQ8NDZ6 487 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 GIMAP4Q9NUV9 329 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 MYO5BQ9ULV0 1848 aa18.29■□□□□ 0.52
CDC42EP3-201ENST00000295324 CLASP2O75122 1294 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 RPSAP08865 295 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 TUBP50607 506 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 USP41Q3LFD5 358 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 ERAP2Q6P179 960 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 HIPK3Q9H422 1215 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 POPDC2Q9HBU9 364 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 ABCC13Q9NSE7 274 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 RIC8BQ9NVN3 520 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 LRRC6Q86X45 466 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 WWOXQ9NZC7 414 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 PHLPP1O60346 1717 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 PCDH8O95206 1070 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 APOA4P06727 396 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 CSE1LP55060 971 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 CCDC157Q569K6 752 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 C6orf10Q5SRN2 563 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 WSCD1Q658N2 575 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 PACSIN1Q9BY11 444 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 LMNAP02545 664 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 ATP5C1P36542 298 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 POU4F1Q01851 419 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 PDCD2Q16342 344 aaPredicted RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 AGAP9Q5VTM2 703 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 TSPAN18Q96SJ8 248 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 ACO2Q99798 780 aaKnown RBP18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 RUBCNLQ9H714 662 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 C2CD2Q9Y426 696 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 C5orf58C9J3I9 102 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 LRP10Q7Z4F1 713 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 FAM167BQ9BTA0 163 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 CDH9Q9ULB4 789 aa18.28■□□□□ 0.52
CDC42EP3-201ENST00000295324 TSPAN3O60637 253 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 C11orf63Q6NUN7 778 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 RRP15Q9Y3B9 282 aaKnown RBP18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 DUSP11O75319 330 aaKnown RBP18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 ST3GAL1Q11201 340 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 C1orf146Q5VVC0 180 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 SCUBE3Q8IX30 993 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 MFSD1Q9H3U5 465 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 COL14A1Q05707 1796 aaKnown RBP18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 ACAP1Q15027 740 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 ATG4AQ8WYN0 398 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 FICDQ9BVA6 458 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 MARCH2Q9P0N8 246 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 ARHGAP20Q9P2F6 1191 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 TFR2Q9UP52 801 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 HES2Q9Y543 173 aa18.27■□□□□ 0.52
CDC42EP3-201ENST00000295324 NFAT5O94916 1531 aa18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 TIMM44O43615 452 aa18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 ATP5BP06576 529 aaKnown RBP18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 LGI2Q8N0V4 545 aa18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 ULBP1Q9BZM6 244 aa18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 VIPAS39Q9H9C1 493 aa18.27■□□□□ 0.51
CDC42EP3-201ENST00000295324 MZF1P28698 734 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 GRIK3Q13003 919 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 E2F4Q16254 413 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 CCNG2Q16589 344 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP1R13LQ8WUF5 828 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 DUSP9Q99956 384 aaKnown RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 HSD17B14Q9BPX1 270 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 RBAK-RBAKDNI3L0D1 243 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 TLL1O43897 1013 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 CSH1P0DML2 217 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 CSH2P0DML3 217 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRKCQQ04759 706 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 MROH9Q5TGP6 573 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 TFAP2DQ7Z6R9 452 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 HOMEZQ8IX15 550 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 VPS37AQ8NEZ2 397 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 SKA1Q96BD8 255 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 OSGEPQ9NPF4 335 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 ASAH2Q9NR71 780 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 NMRK1Q9NWW6 199 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 DDHD2O94830 711 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms