RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 GLIS1Q8NBF1 620 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 ZNF296Q8WUU4 475 aaPredicted RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 RSPH1Q8WYR4 309 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 ROPN1BQ9BZX4 212 aaPredicted RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 ROPN1Q9HAT0 212 aaPredicted RBP18.13■□□□□ 0.49
VRK1-201ENST00000216639 POPDC2Q9HBU9 364 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 GPATCH2LQ9NWQ4 482 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 SAGE1Q9NXZ1 904 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 KANSL3Q9P2N6 904 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 AP4E1Q9UPM8 1137 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 SHOC2Q9UQ13 582 aa18.13■□□□□ 0.49
VRK1-201ENST00000216639 ETS1P14921 441 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 BRCC3P46736 316 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 BFSP2Q13515 415 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 PAN2Q504Q3 1202 aaKnown RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 INTS6LQ5JSJ4 861 aaKnown RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 SLC9A4Q6AI14 798 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 FAF2Q96CS3 445 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 PGM2Q96G03 612 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 SUSD3Q96L08 255 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 SMOQ99835 787 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 ADAM7Q9H2U9 754 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 DHX35Q9H5Z1 703 aaKnown RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 CFAP69A5D8W1 941 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 H7C0C1 242 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 I3L4J1 428 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 CAPN9O14815 690 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 SHOX2O60902 331 aaPredicted RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 SELPP16109 830 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 TFE3P19532 575 aaPredicted RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 TYMPP19971 482 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 IL4RP24394 825 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 L1CAMP32004 1257 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 ACTN2P35609 894 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 ATP5OP48047 213 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 CDR1P51861 262 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 FAM189BP81408 668 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 RNASEH2BQ5TBB1 312 aaKnown RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 OVOS1Q6IE37 1185 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 C1orf228Q6PIY5 440 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 FAM43BQ6ZT52 329 aaPredicted RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 LRRC8DQ7L1W4 858 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 PLD5Q8N7P1 536 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 MYLPFQ96A32 169 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 SLC2A13Q96QE2 648 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 RBM15Q96T37 977 aaKnown RBP eCLIP18.12■□□□□ 0.49
VRK1-201ENST00000216639 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.12■□□□□ 0.49
VRK1-201ENST00000216639 PRDM16Q9HAZ2 1276 aa18.12■□□□□ 0.49
VRK1-201ENST00000216639 NOVA2Q9UNW9 492 aaKnown RBP18.12■□□□□ 0.49
VRK1-201ENST00000216639 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 RGS16O15492 202 aaPredicted RBP18.11■□□□□ 0.49
VRK1-201ENST00000216639 ACSL3O95573 720 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 COL6A1P12109 1028 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 DAOAP59103 153 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 TSPY1Q01534 308 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 MBTPS1Q14703 1052 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 CA9Q16790 459 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 NOMO2Q5JPE7 1267 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 RAB41Q5JT25 222 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 FAM171BQ6P995 826 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 RTN4RL1Q86UN2 441 aaPredicted RBP18.11■□□□□ 0.49
VRK1-201ENST00000216639 PPIL6Q8IXY8 311 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 PCDH19Q8TAB3 1148 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 HASPINQ8TF76 798 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 NT5C3BQ969T7 300 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 TTC25Q96NG3 672 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 NPY6RQ99463 290 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 ULBP1Q9BZM6 244 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 CSNK1G1Q9HCP0 422 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 RCOR3Q9P2K3 495 aaPredicted RBP18.11■□□□□ 0.49
VRK1-201ENST00000216639 PCDHB8Q9UN66 801 aa18.11■□□□□ 0.49
VRK1-201ENST00000216639 FRMPD3Q5JV73 1810 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 TLDC2A0PJX2 215 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 CYP2F1P24903 491 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 HPDP32754 393 aaPredicted RBP18.1■□□□□ 0.49
VRK1-201ENST00000216639 ARL4AP40617 200 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 NDUFV1P49821 464 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 GDF10P55107 478 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 CD300LGQ6UXG3 332 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 NPNTQ6UXI9 565 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 CENPUQ71F23 418 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 ZC3H18Q86VM9 953 aaKnown RBP18.1■□□□□ 0.49
VRK1-201ENST00000216639 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 PQLC3Q8N755 202 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 FAM71DQ8N9W8 422 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 UHMK1Q8TAS1 419 aaKnown RBP18.1■□□□□ 0.49
VRK1-201ENST00000216639 FAM193BQ96PV7 902 aaPredicted RBP18.1■□□□□ 0.49
VRK1-201ENST00000216639 RTP3Q9BQQ7 232 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 CCDC77Q9BR77 488 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 NRDE2Q9H7Z3 1164 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 DNAJC17Q9NVM6 304 aaKnown RBP18.1■□□□□ 0.49
VRK1-201ENST00000216639 RRN3Q9NYV6 651 aa18.1■□□□□ 0.49
VRK1-201ENST00000216639 M0QYT0 321 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 DNM1LO00429 736 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 ZBED1O96006 694 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 IVLP07476 585 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 YY1P25490 414 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 RPL22P35268 128 aaKnown RBP18.09■□□□□ 0.49
VRK1-201ENST00000216639 MAGEA4P43358 317 aa18.09■□□□□ 0.49
VRK1-201ENST00000216639 NR2C2P49116 596 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms