RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Golph3Q9CRA5 298 aa20.82■□□□□ 0.92
Lig3-204ENSMUST00000131537 AlpiF8VPQ6 554 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mroh9G5E8L9 891 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Gm16427J3QN52 483 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Usp35M0QWN7 1009 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Cntn3Q07409 1028 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Lancl3Q8CD19 420 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Dlg2Q91XM9 852 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Dbndd2Q9CRD4 158 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mis12Q9CY25 206 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Cpne8Q9DC53 577 aa20.81■□□□□ 0.92
Lig3-204ENSMUST00000131537 Tldc2A2ACG1 198 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Srbd1Q497V5 1015 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Ssr4Q62186 172 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 R3hdm2Q80TM6 1044 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 DrgxQ8BYH0 263 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Cacnb2Q8CC27 655 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Thap12Q9CUX1 758 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Syde1Q9DBZ9 737 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 IkbkeQ9R0T8 717 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Noc2lQ9WV70 747 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Rasgrp1Q9Z1S3 795 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Slc35g2D3YVE8 412 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Atxn1lP0C7T6 687 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Ap2a2P17427 938 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 RdxP26043 583 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Stmn1P54227 149 aaKnown RBP20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Kcnd1Q03719 651 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Myo6Q64331 1265 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Ccdc73Q8CDM4 1066 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Unc45aQ99KD5 944 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Spata17Q9D552 379 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mta2Q9R190 668 aa20.8■□□□□ 0.92
Lig3-204ENSMUST00000131537 MgamB5THE2 1827 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Igkv16-104A0A0B4J1I1 116 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Gm11758A2BEI6 360 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Gm11757A2BEI8 360 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Samd1D3YXK1 519 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mindy4Q3UQI9 744 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Gpatch2lQ6PE65 482 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Rtn4rl1Q8K0S5 445 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Art3Q8R2G4 371 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 PawrQ925B0 333 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Raver1Q9CW46 748 aaKnown RBP20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mapk13Q9Z1B7 366 aa20.79■□□□□ 0.92
Lig3-204ENSMUST00000131537 Olfr663A0A1B0GSI9 319 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Pja1O55176 578 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Gpr3P35413 330 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 RalaP63321 206 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Slc5a10Q5SWY8 596 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Retreg2Q6NS82 541 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Olfr1198Q7TR12 308 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Rhbdf2Q80WQ6 827 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Creb3l2Q8BH52 521 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Dars2Q8BIP0 653 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Ccdc9Q8VC31 543 aaKnown RBP20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Wdr98Q8VC42 657 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 AjubaQ91XC0 547 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Pcdhgb1Q91XX8 918 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Pde6cQ91ZQ1 861 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Trps1Q925H1 1281 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Rnf34Q99KR6 376 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Yaf2Q99LW6 179 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 LactbQ9EP89 551 aa20.78■□□□□ 0.92
Lig3-204ENSMUST00000131537 Trim30cD3YVI9 513 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Cul4aQ3TCH7 759 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Olfr1080Q7TR67 313 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Haus1Q8BHX1 278 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Nop53Q8BK35 484 aaKnown RBP20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Wrnip1Q91XU0 660 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 PigxQ99LV7 254 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Marc1Q9CW42 340 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Mcur1Q9CXD6 340 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Trpc7Q9WVC5 862 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Stau1Q9Z108 487 aaKnown RBP20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Znf106O88466 1888 aa20.77■□□□□ 0.92
Lig3-204ENSMUST00000131537 Cd44P15379 778 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Slc1a2P43006 572 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Klra5Q60652 266 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Grik1Q60934 836 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Mef2dQ63943 514 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Adcy2Q80TL1 1090 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Gpt2Q8BGT5 522 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Kat14Q8CID0 779 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ttc33Q9D6K7 262 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 IvdQ9JHI5 424 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Pck1Q9Z2V4 622 aa20.77■□□□□ 0.91
Lig3-204ENSMUST00000131537 Arhgef37A1IGU4 676 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Nlgn4lB0F2B4 945 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 C87414E9PWI7 475 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cdh18E9Q9Q6 790 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 H2-T24F8VQG4 363 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Nkx2-5P42582 318 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Apobec1P51908 229 aaKnown RBP20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Nfe2l2Q60795 597 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Cep290Q6A078 2472 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Znf598Q80YR4 908 aaKnown RBP20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Ppp1r15bQ8BFW3 697 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Gpr61Q8C010 449 aa20.76■□□□□ 0.91
Lig3-204ENSMUST00000131537 Samd7Q8C8Y5 445 aa20.76■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms