RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W SSK2P53599 1579 aa-1.73□□□□□ -2.69
RPF1YHR088W RRP5Q05022 1729 aaKnown RBP-1.74□□□□□ -2.69
RPF1YHR088W YLR157W-DP0CE99 70 aa-1.76□□□□□ -2.69
RPF1YHR088W YOR316C-AQ3E806 69 aa-1.76□□□□□ -2.69
RPF1YHR088W YLL066W-BQ8TGJ7 56 aa-1.76□□□□□ -2.69
RPF1YHR088W PDR5P33302 1511 aaKnown RBP-1.76□□□□□ -2.69
RPF1YHR088W ERI1P62651 68 aaKnown RBP-1.77□□□□□ -2.69
RPF1YHR088W RPS30AP0CX33 63 aaKnown RBP-1.78□□□□□ -2.69
RPF1YHR088W RPS30BP0CX34 63 aaKnown RBP-1.78□□□□□ -2.69
RPF1YHR088W RPO31P04051 1460 aa-1.78□□□□□ -2.69
RPF1YHR088W NUP159P40477 1460 aa-1.78□□□□□ -2.69
RPF1YHR088W GCN2P15442 1659 aa-1.78□□□□□ -2.69
RPF1YHR088W VMR1P38735 1592 aa-1.8□□□□□ -2.7
RPF1YHR088W IQG1Q12280 1495 aa-1.8□□□□□ -2.7
RPF1YHR088W DOP1Q03921 1698 aa-1.8□□□□□ -2.7
RPF1YHR088W IML1P47170 1584 aa-1.81□□□□□ -2.7
RPF1YHR088W YCF1P39109 1515 aaKnown RBP-1.81□□□□□ -2.7
RPF1YHR088W TCB3Q03640 1545 aaKnown RBP-1.81□□□□□ -2.7
RPF1YHR088W NUP188P52593 1655 aaKnown RBP-1.82□□□□□ -2.7
RPF1YHR088W CDC25P04821 1589 aa-1.86□□□□□ -2.71
RPF1YHR088W RKR1Q04781 1562 aa-1.86□□□□□ -2.71
RPF1YHR088W UFD4P33202 1483 aa-1.88□□□□□ -2.71
RPF1YHR088W YOL131WQ08270 108 aa-1.89□□□□□ -2.71
RPF1YHR088W YJL133C-AQ3E7A3 74 aa-1.9□□□□□ -2.71
RPF1YHR088W YBT1P32386 1661 aa-1.9□□□□□ -2.71
RPF1YHR088W YOL166W-AQ8TGJ1 51 aa-1.91□□□□□ -2.72
RPF1YHR088W Q0297Q9ZZV8 51 aa-1.93□□□□□ -2.72
RPF1YHR088W STU1P38198 1513 aa-1.95□□□□□ -2.72
RPF1YHR088W YPR010C-AA5Z2X5 72 aa-1.95□□□□□ -2.72
RPF1YHR088W YSY6P38374 65 aa-1.95□□□□□ -2.72
RPF1YHR088W YFL041W-AQ3E817 63 aa-1.95□□□□□ -2.72
RPF1YHR088W TOM7P53507 60 aa-1.96□□□□□ -2.72
RPF1YHR088W YDR034W-BQ6Q5X2 51 aa-1.97□□□□□ -2.72
RPF1YHR088W SCC2Q04002 1493 aa-1.98□□□□□ -2.73
RPF1YHR088W ATG2P53855 1592 aa-2□□□□□ -2.73
RPF1YHR088W HIR3P47171 1648 aa-2.01□□□□□ -2.73
RPF1YHR088W DDR2P89113 61 aa-2.01□□□□□ -2.73
RPF1YHR088W SKI3P17883 1432 aaKnown RBP-2.01□□□□□ -2.73
RPF1YHR088W YHR213W-AQ8TGT4 77 aa-2.02□□□□□ -2.73
RPF1YHR088W SPT6P23615 1451 aaKnown RBP-2.02□□□□□ -2.73
RPF1YHR088W BUD3P25558 1636 aa-2.02□□□□□ -2.73
RPF1YHR088W NUP192P47054 1683 aa-2.03□□□□□ -2.73
RPF1YHR088W YIL046W-AQ3E7Z4 54 aa-2.04□□□□□ -2.74
RPF1YHR088W PMP3P87284 55 aa-2.05□□□□□ -2.74
RPF1YHR088W YIL102C-AQ2V2P5 75 aa-2.05□□□□□ -2.74
RPF1YHR088W COX9P07255 59 aa-2.06□□□□□ -2.74
RPF1YHR088W YKL023C-AQ2V2P3 75 aa-2.08□□□□□ -2.74
RPF1YHR088W MYO4P32492 1471 aa-2.08□□□□□ -2.74
RPF1YHR088W YJL127C-BQ3E828 52 aa-2.09□□□□□ -2.74
RPF1YHR088W CHC1P22137 1653 aaKnown RBP-2.09□□□□□ -2.74
RPF1YHR088W HOR7Q05827 59 aa-2.11□□□□□ -2.75
RPF1YHR088W PAI3P01094 68 aa-2.14□□□□□ -2.75
RPF1YHR088W NUP170P38181 1502 aa-2.16□□□□□ -2.75
RPF1YHR088W MON2P48563 1636 aaPredicted RBP-2.17□□□□□ -2.76
RPF1YHR088W YLR342W-AQ3E810 57 aa-2.17□□□□□ -2.76
RPF1YHR088W USO1P25386 1790 aa-2.18□□□□□ -2.76
RPF1YHR088W MLP2P40457 1679 aa-2.22□□□□□ -2.76
RPF1YHR088W RPL39P04650 51 aa-2.23□□□□□ -2.77
RPF1YHR088W PEP1P32319 1579 aa-2.24□□□□□ -2.77
RPF1YHR088W SMX2P40204 77 aaKnown RBP-2.26□□□□□ -2.77
RPF1YHR088W YFR010W-AP0C5N0 62 aa-2.3□□□□□ -2.78
RPF1YHR088W NCE101Q02820 53 aa-2.31□□□□□ -2.78
RPF1YHR088W VMA9Q3E7B6 73 aa-2.32□□□□□ -2.78
Retrieved 63 of 5,963 RNA–protein pairs in 22.9 ms