RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W SSK2P53599 1579 aa-1.73□□□□□ -2.69
RPF1YHR088W RRP5Q05022 1729 aaKnown RBP-1.74□□□□□ -2.69
RPF1YHR088W YLR157W-DP0CE99 70 aa-1.76□□□□□ -2.69
RPF1YHR088W YOR316C-AQ3E806 69 aa-1.76□□□□□ -2.69
RPF1YHR088W YLL066W-BQ8TGJ7 56 aa-1.76□□□□□ -2.69
RPF1YHR088W PDR5P33302 1511 aaKnown RBP-1.76□□□□□ -2.69
RPF1YHR088W ERI1P62651 68 aaKnown RBP-1.77□□□□□ -2.69
RPF1YHR088W RPS30AP0CX33 63 aaKnown RBP-1.78□□□□□ -2.69
RPF1YHR088W RPS30BP0CX34 63 aaKnown RBP-1.78□□□□□ -2.69
RPF1YHR088W RPO31P04051 1460 aa-1.78□□□□□ -2.69
RPF1YHR088W NUP159P40477 1460 aa-1.78□□□□□ -2.69
RPF1YHR088W GCN2P15442 1659 aa-1.78□□□□□ -2.69
RPF1YHR088W VMR1P38735 1592 aa-1.8□□□□□ -2.7
RPF1YHR088W IQG1Q12280 1495 aa-1.8□□□□□ -2.7
RPF1YHR088W DOP1Q03921 1698 aa-1.8□□□□□ -2.7
RPF1YHR088W IML1P47170 1584 aa-1.81□□□□□ -2.7
RPF1YHR088W YCF1P39109 1515 aaKnown RBP-1.81□□□□□ -2.7
RPF1YHR088W TCB3Q03640 1545 aaKnown RBP-1.81□□□□□ -2.7
RPF1YHR088W NUP188P52593 1655 aaKnown RBP-1.82□□□□□ -2.7
RPF1YHR088W CDC25P04821 1589 aa-1.86□□□□□ -2.71
RPF1YHR088W RKR1Q04781 1562 aa-1.86□□□□□ -2.71
RPF1YHR088W UFD4P33202 1483 aa-1.88□□□□□ -2.71
RPF1YHR088W YOL131WQ08270 108 aa-1.89□□□□□ -2.71
RPF1YHR088W YJL133C-AQ3E7A3 74 aa-1.9□□□□□ -2.71
RPF1YHR088W YBT1P32386 1661 aa-1.9□□□□□ -2.71
RPF1YHR088W YOL166W-AQ8TGJ1 51 aa-1.91□□□□□ -2.72
RPF1YHR088W Q0297Q9ZZV8 51 aa-1.93□□□□□ -2.72
RPF1YHR088W STU1P38198 1513 aa-1.95□□□□□ -2.72
RPF1YHR088W YPR010C-AA5Z2X5 72 aa-1.95□□□□□ -2.72
RPF1YHR088W YSY6P38374 65 aa-1.95□□□□□ -2.72
RPF1YHR088W YFL041W-AQ3E817 63 aa-1.95□□□□□ -2.72
RPF1YHR088W TOM7P53507 60 aa-1.96□□□□□ -2.72
RPF1YHR088W YDR034W-BQ6Q5X2 51 aa-1.97□□□□□ -2.72
RPF1YHR088W SCC2Q04002 1493 aa-1.98□□□□□ -2.73
RPF1YHR088W ATG2P53855 1592 aa-2□□□□□ -2.73
RPF1YHR088W HIR3P47171 1648 aa-2.01□□□□□ -2.73
RPF1YHR088W DDR2P89113 61 aa-2.01□□□□□ -2.73
RPF1YHR088W SKI3P17883 1432 aaKnown RBP-2.01□□□□□ -2.73
RPF1YHR088W YHR213W-AQ8TGT4 77 aa-2.02□□□□□ -2.73
RPF1YHR088W SPT6P23615 1451 aaKnown RBP-2.02□□□□□ -2.73
RPF1YHR088W BUD3P25558 1636 aa-2.02□□□□□ -2.73
RPF1YHR088W NUP192P47054 1683 aa-2.03□□□□□ -2.73
RPF1YHR088W YIL046W-AQ3E7Z4 54 aa-2.04□□□□□ -2.74
RPF1YHR088W PMP3P87284 55 aa-2.05□□□□□ -2.74
RPF1YHR088W YIL102C-AQ2V2P5 75 aa-2.05□□□□□ -2.74
RPF1YHR088W COX9P07255 59 aa-2.06□□□□□ -2.74
RPF1YHR088W YKL023C-AQ2V2P3 75 aa-2.08□□□□□ -2.74
RPF1YHR088W MYO4P32492 1471 aa-2.08□□□□□ -2.74
RPF1YHR088W YJL127C-BQ3E828 52 aa-2.09□□□□□ -2.74
RPF1YHR088W CHC1P22137 1653 aaKnown RBP-2.09□□□□□ -2.74
RPF1YHR088W HOR7Q05827 59 aa-2.11□□□□□ -2.75
RPF1YHR088W PAI3P01094 68 aa-2.14□□□□□ -2.75
RPF1YHR088W NUP170P38181 1502 aa-2.16□□□□□ -2.75
RPF1YHR088W MON2P48563 1636 aaPredicted RBP-2.17□□□□□ -2.76
RPF1YHR088W YLR342W-AQ3E810 57 aa-2.17□□□□□ -2.76
RPF1YHR088W USO1P25386 1790 aa-2.18□□□□□ -2.76
RPF1YHR088W MLP2P40457 1679 aa-2.22□□□□□ -2.76
RPF1YHR088W RPL39P04650 51 aa-2.23□□□□□ -2.77
RPF1YHR088W PEP1P32319 1579 aa-2.24□□□□□ -2.77
RPF1YHR088W SMX2P40204 77 aaKnown RBP-2.26□□□□□ -2.77
RPF1YHR088W YFR010W-AP0C5N0 62 aa-2.3□□□□□ -2.78
RPF1YHR088W NCE101Q02820 53 aa-2.31□□□□□ -2.78
RPF1YHR088W VMA9Q3E7B6 73 aa-2.32□□□□□ -2.78
Retrieved 63 of 5,963 RNA–protein pairs in 10.3 ms