RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FER1L6Q2WGJ9 1857 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PRR5-ARHGAP8B1AHC4 643 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 F8W8V4 182 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 SPAG6O75602 509 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 RFPL1O75677 317 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 CIB2O75838 187 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 KRT37O76014 449 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TM7SF2O76062 418 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 MAP3K6O95382 1288 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 BAG2O95816 211 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRUB2O95900 331 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 CDH6P55285 790 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ARHGAP8P85298 464 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 SH3PXD2AQ5TCZ1 1133 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ANGEL2Q5VTE6 544 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 C1orf228Q6PIY5 440 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ZCCHC23Q6ZST2 131 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 NET1Q7Z628 596 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 LRRN4Q8WUT4 740 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 FGD4Q96M96 766 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRAPPC9Q96Q05 1148 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRIM56Q9BRZ2 755 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 WWP1Q9H0M0 922 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PLAC1Q9HBJ0 212 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PNPLA8Q9NP80 782 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ZNF277Q9NRM2 450 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRPC5Q9UL62 973 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PPME1Q9Y570 386 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 COL4A5P29400 1685 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 MEI4A8MW99 385 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 WNT10BO00744 389 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ADCY3O60266 1144 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 RNF8O76064 485 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TOP3BO95985 862 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 STIP1P31948 543 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 AP3M2P53677 418 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 CDH8P55286 799 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 UBAP2LQ14157 1087 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 DUOXA2Q1HG44 320 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TRMT5Q32P41 509 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 C1orf146Q5VVC0 180 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ATG16L1Q676U5 607 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 MYLK4Q86YV6 388 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 NUDCD3Q8IVD9 361 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 KCNN1Q92952 543 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 EBF4Q9BQW3 602 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 XYLT2Q9H1B5 865 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 TMEM134Q9H6X4 195 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 RSAD1Q9HA92 442 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 POPDC2Q9HBU9 364 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PCMTD2Q9NV79 361 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 SIRPGQ9P1W8 387 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 ZC3H7BQ9UGR2 993 aaKnown RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 PPM1HQ9ULR3 514 aa11.35□□□□□ -0.59
SNIP1-204ENST00000638725 MAFBQ9Y5Q3 323 aaPredicted RBP11.35□□□□□ -0.59
SNIP1-204ENST00000638725 SPATA31C2B4DYI2 1134 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CHADO15335 359 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 LYNP07948 512 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CSH1P0DML2 217 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CSH2P0DML3 217 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 ACTR3P61158 418 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 OSTNP61366 133 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 C6orf163Q5TEZ5 329 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 KRT27Q7Z3Y8 459 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CDHR1Q96JP9 859 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 RILPQ96NA2 401 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CCDC106Q9BWC9 280 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 TRIM4Q9C037 500 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.34□□□□□ -0.59
SNIP1-204ENST00000638725 NDE1Q9NXR1 346 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CPSF2Q9P2I0 782 aaKnown RBP11.34□□□□□ -0.59
SNIP1-204ENST00000638725 KCNN4O15554 427 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 CCNFP41002 786 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 IRX4P78413 519 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 DSG1Q02413 1049 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 GSTA3Q16772 222 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 ZFAND2BQ8WV99 257 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 MTBPQ96DY7 904 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 GBP5Q96PP8 586 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 ECSITQ9BQ95 431 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 LHX5Q9H2C1 402 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 USP29Q9HBJ7 922 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 DDX43Q9NXZ2 648 aaKnown RBP11.34□□□□□ -0.59
SNIP1-204ENST00000638725 HMGXB4Q9UGU5 601 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 ZNF180Q9UJW8 692 aa11.34□□□□□ -0.59
SNIP1-204ENST00000638725 HBS1LQ9Y450 684 aaKnown RBP11.34□□□□□ -0.59
SNIP1-204ENST00000638725 PIK3R2O00459 728 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 MSCO60682 206 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 TOM1L1O75674 476 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 HOXC6P09630 235 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 OSBPP22059 807 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 AP2B1P63010 937 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 CDC16Q13042 620 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 DNAL1Q4LDG9 190 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 ZPBP2Q6X784 338 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 CAND1Q86VP6 1230 aaKnown RBP11.33□□□□□ -0.59
SNIP1-204ENST00000638725 CRLF3Q8IUI8 442 aa11.33□□□□□ -0.59
SNIP1-204ENST00000638725 REPS2Q8NFH8 660 aa11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms