RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 RIF1Q5UIP0 2472 aaKnown RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 FAM170BA6NMN3 283 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 MAN2B1O00754 1011 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 OLFM2O95897 454 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 OAS1P00973 400 aaKnown RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 CCDC192P0DO97 292 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 TCF3P15923 654 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 TBXAS1P24557 533 aaPredicted RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 ADORA2BP29275 332 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 RAD23BP54727 409 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 TNK2Q07912 1038 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 CETN1Q12798 172 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 KCNH2Q12809 1159 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 IFRD2Q12894 506 aaPredicted RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 FZD5Q13467 585 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 ZNF77Q15935 545 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 ZNF394Q53GI3 561 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 PPP1R26Q5T8A7 1209 aaPredicted RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 SNX30Q5VWJ9 437 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 BRICD5Q6PL45 260 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 CLEC20AQ6ZU45 233 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 PDZD8Q8NEN9 1154 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 ZNF592Q92610 1267 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 FBXO32Q969P5 355 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 CLDN23Q96B33 292 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 MSANTD3Q96H12 275 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 TMEM176AQ96HP8 235 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 HEXIM2Q96MH2 286 aaKnown RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 DUSP16Q9BY84 665 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 IRF2BPLQ9H1B7 796 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 FBXO44Q9H4M3 255 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 C8orf33Q9H7E9 229 aaPredicted RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 PNPLA8Q9NP80 782 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 GKN1Q9NS71 199 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
CTSA-215ENST00000607187 MRPS17Q9Y2R5 130 aaKnown RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTSA-215ENST00000607187 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
CTSA-215ENST00000607187 HHLA1C9JL84 531 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 H0Y858 1186 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 NCAM2O15394 837 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 ABL1P00519 1130 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 AFPP02771 609 aaKnown RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 ZDHHC11BP0C7U3 371 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 JUNDP17535 347 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 CTHP32929 405 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 SCNN1AP37088 669 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 MAGEA9P43362 315 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 RPS9P46781 194 aaKnown RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 TUBP50607 506 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 KPNA1P52294 538 aaPredicted RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 YWHAEP62258 255 aaKnown RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 SLC7A9P82251 487 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 ZXDBP98169 803 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 LRMPQ12912 555 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 USP4Q13107 963 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 MTF1Q14872 753 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 PTPRNQ16849 979 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 ITPRIPL2Q3MIP1 535 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 DPCR1Q3MIW9 517 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 CC2D1AQ6P1N0 951 aaPredicted RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 RALGPS2Q86X27 583 aaPredicted RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 IRF2BP1Q8IU81 584 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 UBR7Q8N806 425 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 GPT2Q8TD30 523 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 FAM3CQ92520 227 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 CFAP54Q96N23 3096 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 NT5C1BQ96P26 610 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 RNF38Q9H0F5 515 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 HPS4Q9NQG7 708 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
CTSA-215ENST00000607187 GPSM3Q9Y4H4 160 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 PCDHB9Q9Y5E1 797 aa10.54□□□□□ -0.72
CTSA-215ENST00000607187 OTOL1A6NHN0 477 aaPredicted RBP10.53□□□□□ -0.72
CTSA-215ENST00000607187 SPECC1L-ADORA2AF8WAN1 911 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 SOX9P48436 509 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 PGFP49763 221 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 PTK2Q05397 1052 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 RUNX3Q13761 415 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 PDGFRLQ15198 375 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 ANGPT1Q15389 498 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 ARHGAP17Q68EM7 881 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 TRIM68Q6AZZ1 485 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 TXNDC11Q6PKC3 985 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 GPRIN1Q7Z2K8 1008 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 C1orf210Q8IVY1 113 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 KIAA1958Q8N8K9 716 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 EHBP1Q8NDI1 1231 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 SH3RF2Q8TEC5 729 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 OSCP1Q8WVF1 389 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 ZFRQ96KR1 1074 aaKnown RBP10.53□□□□□ -0.72
CTSA-215ENST00000607187 CNOT6LQ96LI5 555 aaKnown RBP10.53□□□□□ -0.72
CTSA-215ENST00000607187 EBF3Q9H4W6 596 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 GMIPQ9P107 970 aa10.53□□□□□ -0.72
CTSA-215ENST00000607187 NDRG2Q9UN36 371 aaKnown RBP10.53□□□□□ -0.72
CTSA-215ENST00000607187 SCML2Q9UQR0 700 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms