RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NAP1L4Q99733 375 aaKnown RBP6.92□□□□□ -1.3
DNMT1-222ENST00000590619 PYM1Q9BRP8 204 aaKnown RBP6.92□□□□□ -1.3
DNMT1-222ENST00000590619 C6orf106Q9H6K1 298 aaPredicted RBP6.92□□□□□ -1.3
DNMT1-222ENST00000590619 TUFT1Q9NNX1 390 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 CFAP97Q9P2B7 532 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 TBC1D14Q9P2M4 693 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 ARHGAP28Q9P2N2 729 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 GTF3C4Q9UKN8 822 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
DNMT1-222ENST00000590619 HOXC11O43248 304 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 OLFM2O95897 454 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ITGAVP06756 1048 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 CISD3P0C7P0 127 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 CKMT2P17540 419 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 LSSP48449 732 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 PDE6CP51160 858 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 USP46P62068 366 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 MCL1Q07820 350 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 BNIP3Q12983 259 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ILKQ13418 452 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 PDIA5Q14554 519 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 CALCRLQ16602 461 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 NFE2Q16621 373 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ANO4Q32M45 955 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 INAVAQ3KP66 663 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 CCDC81Q6ZN84 652 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 SCN4BQ8IWT1 228 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 DAW1Q8N136 415 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 SIPA1Q96FS4 1042 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 VCPIP1Q96JH7 1222 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 PKMYT1Q99640 499 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 SEMA3CQ99985 751 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ORAI3Q9BRQ5 295 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 NTPCRQ9BSD7 190 aaKnown RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ESYT1Q9BSJ8 1104 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 RPF1Q9H9Y2 349 aaKnown RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ASCL3Q9NQ33 180 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 GJB4Q9NTQ9 266 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 TRPM5Q9NZQ8 1165 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 LRWD1Q9UFC0 647 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.91□□□□□ -1.3
DNMT1-222ENST00000590619 STON1Q9Y6Q2 735 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 LRRK2Q5S007 2527 aa6.91□□□□□ -1.3
DNMT1-222ENST00000590619 C2CD3Q4AC94 2353 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 WNT7AO00755 349 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 SLC16A4O15374 487 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 CLDN3O15551 220 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 XPOTO43592 962 aaKnown RBP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 TSPAN3O60637 253 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 DEXIO95424 95 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ACSL1P33121 698 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 GABREP78334 506 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 SKOR1P84550 965 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 E2F1Q01094 437 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ST3GAL1Q11201 340 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 NOLC1Q14978 699 aaKnown RBP eCLIP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ENOX2Q16206 610 aaKnown RBP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ECM1Q16610 540 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 CCDC142Q17RM4 750 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 RNF20Q5VTR2 975 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 GRAMD4Q6IC98 578 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 JADE1Q6IE81 842 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 FAM124AQ86V42 546 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 FAM177A1Q8N128 213 aaPredicted RBP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 FBXL16Q8N461 479 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 FAM26EQ8N5C1 309 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 LEO1Q8WVC0 666 aaPredicted RBP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 SNX19Q92543 992 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 WBP2Q969T9 261 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 BIRC7Q96CA5 298 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 OTUB2Q96DC9 234 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 TSPAN18Q96SJ8 248 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ELF4Q99607 663 aaPredicted RBP6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ACBD6Q9BR61 282 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 TRIM9Q9C026 710 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 PCED1AQ9H1Q7 454 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 LRRC4CQ9HCJ2 640 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ABCB6Q9NP58 842 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ANO2Q9NQ90 1003 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 KMT5AQ9NQR1 393 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 SPHK2Q9NRA0 654 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ADAMTS1Q9UHI8 967 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 BOD1L1Q8NFC6 3051 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 PHLPP2Q6ZVD8 1323 aa6.9□□□□□ -1.3
DNMT1-222ENST00000590619 ICE1Q9Y2F5 2266 aa6.9□□□□□ -1.31
DNMT1-222ENST00000590619 FBN2P35556 2912 aa6.9□□□□□ -1.31
DNMT1-222ENST00000590619 KPNA7A9QM74 516 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 LAD1O00515 517 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 VILLO15195 856 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 USP12O75317 370 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 ABL1P00519 1130 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 OAS1P00973 400 aaKnown RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 WNT1P04628 370 aa6.89□□□□□ -1.31
DNMT1-222ENST00000590619 HMGB1P09429 215 aaKnown RBP6.89□□□□□ -1.31
DNMT1-222ENST00000590619 FAM87AP0C7U9 286 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms