RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 CATSPER3Q86XQ3 398 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 GATAD2AQ86YP4 633 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 DHX40Q8IX18 779 aaKnown RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 SLFN12Q8IYM2 578 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 FAM177A1Q8N128 213 aaPredicted RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 NAT16Q8N8M0 369 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 DCBLD1Q8N8Z6 715 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 IGSF8Q969P0 613 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 MRPL4Q9BYD3 311 aaKnown RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 MKRN2Q9H000 416 aaKnown RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 RNF38Q9H0F5 515 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 ARHGAP28Q9P2N2 729 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 ORC3Q9UBD5 711 aaPredicted RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 UXTQ9UBK9 157 aaPredicted RBP6.54□□□□□ -1.36
VPS25-204ENST00000589577 KCNJ14Q9UNX9 436 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 ANKRD6Q9Y2G4 727 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 STARD13Q9Y3M8 1113 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 PCDHB1Q9Y5F3 818 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 ZFHX3Q15911 3703 aa6.54□□□□□ -1.36
VPS25-204ENST00000589577 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 WASH3PC4AMC7 463 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 PRRT4C9JH25 899 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 KLK10O43240 276 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 HOXC11O43248 304 aaPredicted RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 FAM189A1O60320 539 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 PRPF40AO75400 957 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 ADH1CP00326 375 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 IGLV3-19P01714 112 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 NFICP08651 508 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 C1SP09871 688 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 GLDCP23378 1020 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 CYP2F1P24903 491 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 CTSKP43235 329 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 NPTX2P47972 431 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 TPMTP51580 245 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 AFF3P51826 1226 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 SLC7A9P82251 487 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 INSM1Q01101 510 aaPredicted RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 SMARCB1Q12824 385 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 NOLC1Q14978 699 aaKnown RBP eCLIP6.53□□□□□ -1.36
VPS25-204ENST00000589577 SHBQ15464 509 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 FUT11Q495W5 492 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 WSCD1Q658N2 575 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 PIK3AP1Q6ZUJ8 805 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 METTL3Q86U44 580 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 CHPFQ8IZ52 775 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 DAW1Q8N136 415 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 CACTIN-AS1Q8N1I8 211 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 KIAA1958Q8N8K9 716 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 NECAB1Q8N987 351 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 ENGASEQ8NFI3 743 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 KCNE4Q8WWG9 221 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 RFFLQ8WZ73 363 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 C8orf76Q96K31 380 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 CNDP2Q96KP4 475 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 ZNF578Q96N58 590 aaPredicted RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 IPO9Q96P70 1041 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 PKMYT1Q99640 499 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 TRIM9Q9C026 710 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 TTC12Q9H892 705 aaPredicted RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 PLEKHA5Q9HAU0 1116 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 TM9SF3Q9HD45 589 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 ASCL3Q9NQ33 180 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 ITM2CQ9NQX7 267 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 GJB4Q9NTQ9 266 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 SMPD4Q9NXE4 827 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 UBQLN1Q9UMX0 589 aaKnown RBP6.53□□□□□ -1.36
VPS25-204ENST00000589577 PCDHA12Q9UN75 941 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 PCDHB5Q9Y5E4 795 aa6.53□□□□□ -1.36
VPS25-204ENST00000589577 KIF26BQ2KJY2 2108 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 A0A1B0GTQ1 180 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 LACTBL1A8MY62 500 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 PIRO00625 290 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 DXOO77932 396 aaKnown RBP6.52□□□□□ -1.37
VPS25-204ENST00000589577 LDOC1O95751 146 aaPredicted RBP6.52□□□□□ -1.37
VPS25-204ENST00000589577 MPOP05164 745 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 CDK4P11802 303 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 GJB2P29033 226 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 GRIK1P39086 918 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 GRIA4P48058 902 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 PEX3P56589 373 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 USP46P62068 366 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 SKOR1P84550 965 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 TLE1Q04724 770 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 MAPK7Q13164 816 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 CUL4AQ13619 759 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 ENOX2Q16206 610 aaKnown RBP6.52□□□□□ -1.37
VPS25-204ENST00000589577 SPATA1Q5VX52 437 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 C9orf57Q5W0N0 161 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 GALNT17Q6IS24 598 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 LEO1Q8WVC0 666 aaPredicted RBP6.52□□□□□ -1.37
VPS25-204ENST00000589577 IFT74Q96LB3 600 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 MTMR9Q96QG7 549 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 ORAI3Q9BRQ5 295 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 TCHPQ9BT92 498 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 TMEM134Q9H6X4 195 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 FOXD4L1Q9NU39 408 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 CFAP97Q9P2B7 532 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 CLCA2Q9UQC9 943 aa6.52□□□□□ -1.37
VPS25-204ENST00000589577 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms