RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TMC5Q6UXY8 1006 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 XYLT1Q86Y38 959 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 ANKRD52Q8NB46 1076 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 CMASQ8NFW8 434 aaPredicted RBP13.22□□□□□ -0.29
SRSF1-204ENST00000581979 SPATA18Q8TC71 538 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 UBE2Q2Q8WVN8 375 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 UBXN4Q92575 508 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 MED10Q9BTT4 135 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 TRIM7Q9C029 511 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 KCNH6Q9H252 994 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 IP6K2Q9UHH9 426 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 LCMT1Q9UIC8 334 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 CDH9Q9ULB4 789 aa13.22□□□□□ -0.29
SRSF1-204ENST00000581979 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.29
SRSF1-204ENST00000581979 MUC6Q6W4X9 2439 aa13.21□□□□□ -0.29
SRSF1-204ENST00000581979 TMEM191CA6NGB0 347 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 TMEM189-UBE2V1I3L0A0 370 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 PIK3R2O00459 728 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 CEP104O60308 925 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 PROSCO94903 275 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 PAPLNO95428 1278 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 SP100P23497 879 aaPredicted RBP13.21□□□□□ -0.3
SRSF1-204ENST00000581979 PCSK1P29120 753 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 SIGLEC14Q08ET2 396 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 NAA30Q147X3 362 aaPredicted RBP13.21□□□□□ -0.3
SRSF1-204ENST00000581979 OR6B2Q6IFH4 312 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 ZDHHC14Q8IZN3 488 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 MS4A14Q96JA4 679 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 SUSD3Q96L08 255 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.21□□□□□ -0.3
SRSF1-204ENST00000581979 EHD2Q9NZN4 543 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 FNIP2Q9P278 1114 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 DPP7Q9UHL4 492 aa13.21□□□□□ -0.3
SRSF1-204ENST00000581979 CCDC66A2RUB6 948 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 E5RJQ4 531 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 TULP2O00295 520 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 PDE2AO00408 941 aaPredicted RBP13.2□□□□□ -0.3
SRSF1-204ENST00000581979 TADA2AO75478 443 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 GLUD1P00367 558 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 CYP11A1P05108 521 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 KRT3P12035 628 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 TKTP29401 623 aaKnown RBP13.2□□□□□ -0.3
SRSF1-204ENST00000581979 SLC8A3P57103 927 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 RPL7AP62424 266 aaKnown RBP13.2□□□□□ -0.3
SRSF1-204ENST00000581979 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 PPP1R15BQ5SWA1 713 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 PMF1Q6P1K2 205 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 CPNE8Q86YQ8 564 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 THEM5Q8N1Q8 247 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 HDAC7Q8WUI4 952 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 SLC35F5Q8WV83 523 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 TSC1Q92574 1164 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 ASIC4Q96FT7 647 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
SRSF1-204ENST00000581979 CRTAC1Q9NQ79 661 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 METTL5Q9NRN9 209 aaKnown RBP13.2□□□□□ -0.3
SRSF1-204ENST00000581979 SMARCAL1Q9NZC9 954 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 PCDHB8Q9UN66 801 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 SF3B1O75533 1304 aaKnown RBP eCLIP13.2□□□□□ -0.35e-6■■■□□ 15.3
SRSF1-204ENST00000581979 PLXNA3P51805 1871 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 MYO10Q9HD67 2058 aa13.2□□□□□ -0.3
SRSF1-204ENST00000581979 SIGLEC16A6NMB1 481 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 DYNC1I1O14576 645 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 TRAPPC3O43617 180 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 TYMPP19971 482 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CTNNA2P26232 953 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CTNNA1P35221 906 aaKnown RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 RNASE9P60153 205 aaKnown RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CREMQ03060 361 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 C2orf54Q08AI8 447 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 FAM102AQ5T9C2 384 aaPredicted RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 OVOS1Q6IE37 1185 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 WDFY4Q6ZS81 3184 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 FAM183BPQ6ZVS7 135 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 RSRC2Q7L4I2 434 aaKnown RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 FUKQ8N0W3 1084 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 PLCD3Q8N3E9 789 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 TDRD5Q8NAT2 981 aaKnown RBP13.19□□□□□ -0.3
SRSF1-204ENST00000581979 STK32AQ8WU08 396 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 KRT35Q92764 455 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CD101Q93033 1021 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 PBXIP1Q96AQ6 731 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 MCRS1Q96EZ8 462 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 ACBD6Q9BR61 282 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 SLC4A5Q9BY07 1137 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CLDN5O00501 218 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 MAN1A1P33908 653 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 TUBB4BP68371 445 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 ELF2Q15723 593 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 CCDC142Q17RM4 750 aa13.19□□□□□ -0.3
SRSF1-204ENST00000581979 RTP2Q5QGT7 225 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms