RNA–Protein interactions for RNA: ENST00000552744.5

SYT1-212, Transcript of synaptotagmin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYT1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-212ENST00000552744 RAB6CQ53S08 254 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 SH3PXD2AQ5TCZ1 1133 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 C16orf46Q6P387 395 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 RSPH3Q86UC2 560 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 ATP6V0A1Q93050 837 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 UBE2OQ9C0C9 1292 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 WWP1Q9H0M0 922 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 RAB6CQ9H0N0 254 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 MMADHCQ9H3L0 296 aaPredicted RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 OCEL1Q9H607 264 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 ZC3H7BQ9UGR2 993 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 TAGLN3Q9UI15 199 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 G3BP2Q9UN86 482 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 LOXHD1Q8IVV2 1947 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 MYO18AQ92614 2054 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 ANKRD33BA6NCL7 494 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 CCDC160A6NGH7 325 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 A6NJR5 290 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 C3orf70A6NLC5 250 aaPredicted RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 KCNN4O15554 427 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 ZMPSTE24O75844 475 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 KRT37O76014 449 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 PGM3O95394 542 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 DHRS4L1P0CG22 281 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 CHRNA5P30532 468 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 PTGER2P43116 358 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 PDE1BQ01064 536 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 TRPC3Q13507 836 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 HIC1Q14526 733 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 DLGAP5Q15398 846 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 TRMT5Q32P41 509 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 PTPN20Q4JDL3 420 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 TCHHL1Q5QJ38 904 aaPredicted RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 LRRC38Q5VT99 294 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 DENND1BQ6P3S1 775 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 SCYL2Q6P3W7 929 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 DENND5BQ6ZUT9 1274 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 POLNQ7Z5Q5 900 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 SLC26A11Q86WA9 606 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 CHSY1Q86X52 802 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 MCPH1Q8NEM0 835 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 ZNF526Q8TF50 670 aaPredicted RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 EZH1Q92800 747 aaPredicted RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 NMD3Q96D46 503 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 PXMP2Q9NR77 195 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 PIH1D1Q9NWS0 290 aaKnown RBP8.12□□□□□ -1.11
SYT1-212ENST00000552744 ARHGAP28Q9P2N2 729 aa8.12□□□□□ -1.11
SYT1-212ENST00000552744 hCG_2014768A0A024R1R8 64 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 CAPN14A8MX76 684 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 NFASCO94856 1347 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 EDN1P05305 212 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 SNRPAP09012 282 aaKnown RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 CCNFP41002 786 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 CDH6P55285 790 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 CDH8P55286 799 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 ACTR3P61158 418 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 MRPS5P82675 430 aaKnown RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 ROR1Q01973 937 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 SLC25A11Q02978 314 aaKnown RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 DSG2Q14126 1118 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 GRAMD1BQ3KR37 738 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 SLC27A3Q5K4L6 730 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 ATG16L1Q676U5 607 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 BBS12Q6ZW61 710 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 NET1Q7Z628 596 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 APLFQ8IW19 511 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYT1-212ENST00000552744 TTC13Q8NBP0 860 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 ZFAND2BQ8WV99 257 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 NDNQ99608 321 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYT1-212ENST00000552744 KCNK4Q9NYG8 393 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 CLIC5Q9NZA1 410 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 CNTN3Q9P232 1028 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 PLLPQ9Y342 182 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 RIPK3Q9Y572 518 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 E7ESA3 106 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 MAGEC1O60732 1142 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 OR6B1O95007 311 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 PROCP04070 461 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 NR3C2P08235 984 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 KRT7P08729 469 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 NCF2P19878 526 aaPredicted RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 MIPP30301 263 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 RAP1GDS1P52306 607 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 SLC18A2Q05940 514 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 STX3Q13277 289 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 MED21Q13503 144 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 EMC2Q15006 297 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 TRIP10Q15642 601 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 LIN52Q52LA3 116 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 SFT2D3Q587I9 215 aa8.11□□□□□ -1.11
SYT1-212ENST00000552744 TRMT10BQ6PF06 316 aaKnown RBP8.11□□□□□ -1.11
SYT1-212ENST00000552744 NIPA1Q7RTP0 329 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms