RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 SH3BP1Q9Y3L3 701 aa17.96■□□□□ 0.47
CACNB3-222ENST00000552465 STARD13Q9Y3M8 1113 aa17.96■□□□□ 0.47
CACNB3-222ENST00000552465 GPSM3Q9Y4H4 160 aa17.96■□□□□ 0.47
CACNB3-222ENST00000552465 GON4LQ3T8J9 2241 aa17.96■□□□□ 0.47
CACNB3-222ENST00000552465 CLDN5O00501 218 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 TRIM24O15164 1050 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 ZBTB24O43167 697 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 SH3BP5O60239 455 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 GJB3O75712 270 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 RTN3O95197 1032 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 ANO4Q32M45 955 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 HECTD3Q5T447 861 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 C19orf48Q6RUI8 117 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 TMEM25Q86YD3 366 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 BBS7Q8IWZ6 715 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 TERB1Q8NA31 727 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 ADAMTS14Q8WXS8 1223 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 FBXO32Q969P5 355 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 ZNF419Q96HQ0 510 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 HSPA12BQ96MM6 686 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 DUSP9Q99956 384 aaKnown RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 CD248Q9HCU0 757 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 CYP8B1Q9UNU6 501 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 CLIC4Q9Y696 253 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 ASPMQ8IZT6 3477 aa17.95■□□□□ 0.46
CACNB3-222ENST00000552465 FASNP49327 2511 aaKnown RBP17.95■□□□□ 0.46
CACNB3-222ENST00000552465 PLXND1Q9Y4D7 1925 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 SNX30Q5VWJ9 437 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 EGFLAMQ63HQ2 1017 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 IPO4Q8TEX9 1081 aaKnown RBP17.94■□□□□ 0.46
CACNB3-222ENST00000552465 WBP2Q969T9 261 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 KCNK16Q96T55 309 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 ACOX2Q99424 681 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 FAM124BQ9H5Z6 455 aaPredicted RBP17.94■□□□□ 0.46
CACNB3-222ENST00000552465 CCSER2Q9H7U1 834 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 PCDHB9Q9Y5E1 797 aa17.94■□□□□ 0.46
CACNB3-222ENST00000552465 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
CACNB3-222ENST00000552465 PI4KAP42356 2102 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 PCDH15Q96QU1 1955 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 NDUFV2P19404 249 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 TXLNAP40222 546 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 PLEKHG6Q3KR16 790 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 WDR72Q3MJ13 1102 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 SOWAHCQ53LP3 525 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-222ENST00000552465 GRAMD4Q6IC98 578 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 SDE2Q6IQ49 451 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 CCNI2Q6ZMN8 369 aaPredicted RBP17.93■□□□□ 0.46
CACNB3-222ENST00000552465 B3GALNT2Q8NCR0 500 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 SCAMP5Q8TAC9 235 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 CLIC6Q96NY7 704 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 KIAA1586Q9HCI6 787 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 IL37Q9NZH6 218 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 HSPBP1Q9NZL4 362 aa17.93■□□□□ 0.46
CACNB3-222ENST00000552465 A8MXQ7 604 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 CD2BP2O95400 341 aaKnown RBP17.92■□□□□ 0.46
CACNB3-222ENST00000552465 FTH1P19P0C7X4 201 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 TUBP50607 506 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 TNNC1P63316 161 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 CCDC73Q6ZRK6 1079 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 PDZD3Q86UT5 571 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 NAXDQ8IW45 347 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 CHPFQ8IZ52 775 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 RGL4Q8IZJ4 473 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 PNPLA1Q8N8W4 532 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 GLIS3Q8NEA6 775 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 ERLEC1Q96DZ1 483 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 GABRG3Q99928 467 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 PANK2Q9BZ23 570 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 DNAJC17Q9NVM6 304 aaKnown RBP17.92■□□□□ 0.46
CACNB3-222ENST00000552465 SUSD2Q9UGT4 822 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 MYOFQ9NZM1 2061 aa17.92■□□□□ 0.46
CACNB3-222ENST00000552465 NDUFS2O75306 463 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 ZDHHC11BP0C7U3 371 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 DLATP10515 647 aaKnown RBP17.91■□□□□ 0.46
CACNB3-222ENST00000552465 GNSP15586 552 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 TNNI1P19237 187 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 HOXD13P35453 343 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 STAT6P42226 847 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 SYCP2LQ5T4T6 812 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 STXBP4Q6ZWJ1 553 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 HTR3DQ70Z44 454 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 CCDC65Q8IXS2 484 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 RDH13Q8NBN7 331 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 FOXJ1Q92949 421 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 CCDC86Q9H6F5 360 aaKnown RBP17.91■□□□□ 0.46
CACNB3-222ENST00000552465 GMIPQ9P107 970 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 ADAMTS9Q9P2N4 1935 aa17.91■□□□□ 0.46
CACNB3-222ENST00000552465 PRRT4C9JH25 899 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 CACNG3O60359 315 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 GREM1O60565 184 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 STAU1O95793 577 aaKnown RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 IRF1P10914 325 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 MAOBP27338 520 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 SLC5A3P53794 718 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 SNRNP35Q16560 246 aaKnown RBP17.9■□□□□ 0.46
CACNB3-222ENST00000552465 COL28A1Q2UY09 1125 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 WDR45BQ5MNZ6 344 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 PAQR9Q6ZVX9 377 aa17.9■□□□□ 0.46
CACNB3-222ENST00000552465 HPS3Q969F9 1004 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms