RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 RAB41Q5JT25 222 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 VITQ6UXI7 678 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 GPRIN1Q7Z2K8 1008 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 ARHGAP18Q8N392 663 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 FLCNQ8NFG4 579 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 BPIFB1Q8TDL5 484 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 SECISBP2LQ93073 1101 aaKnown RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 NAP1L5Q96NT1 182 aaPredicted RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 RNF38Q9H0F5 515 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 SMG9Q9H0W8 520 aaKnown RBP11.18□□□□□ -0.62
PTCH1-225ENST00000551845 SMOC2Q9H3U7 446 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 BRD9Q9H8M2 597 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 KIF9Q9HAQ2 790 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 ACP6Q9NPH0 428 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 SLC2A4RGQ9NR83 387 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 GMIPQ9P107 970 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 FBXL21Q9UKT6 434 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 SIK3Q9Y2K2 1263 aa11.18□□□□□ -0.62
PTCH1-225ENST00000551845 CACNA1AO00555 2505 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 TULP2O00295 520 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CHADO15335 359 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 KRT37O76014 449 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 MBL2P11226 248 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-225ENST00000551845 LCP1P13796 627 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CYP11B1P15538 503 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 GDI1P31150 447 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 ATP5C1P36542 298 aaKnown RBP11.17□□□□□ -0.62
PTCH1-225ENST00000551845 ACADSBP45954 432 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 TUBP50607 506 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CLCN5P51795 746 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 UBASH3AP57075 661 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SNX16P57768 344 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SLC7A9P82251 487 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 FANCCQ00597 558 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 GRM2Q14416 872 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 MEA1Q16626 185 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 ARHGAP29Q52LW3 1261 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SLC44A4Q53GD3 710 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 PM20D1Q6GTS8 502 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 PMF1Q6P1K2 205 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CCDC186Q7Z3E2 898 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CACNA2D4Q7Z3S7 1137 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SLC47A2Q86VL8 602 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SIX6OS1Q8N1H7 587 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 STK32AQ8WU08 396 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 RMDN1Q96DB5 314 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 SLC22A12Q96S37 553 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CDK5RAP1Q96SZ6 601 aaKnown RBP11.17□□□□□ -0.62
PTCH1-225ENST00000551845 GANQ9H2C0 597 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 LHX5Q9H2C1 402 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 NLRC4Q9NPP4 1024 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CNGB3Q9NQW8 809 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 ST7Q9NRC1 585 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-225ENST00000551845 ARHGAP26Q9UNA1 814 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CEP83Q9Y592 693 aa11.17□□□□□ -0.62
PTCH1-225ENST00000551845 CACNA1HO95180 2353 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 A0A1W2PQC6 194 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 A0A1W2PQH9 124 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 F8VZ95 297 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 STK25O00506 426 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 PRAMEF12O95522 483 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 OAS1P00973 400 aaKnown RBP11.16□□□□□ -0.62
PTCH1-225ENST00000551845 TPM3P06753 285 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 CCDC172P0C7W6 258 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 RARGP13631 454 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 SOX5P35711 763 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 RGS7P49802 495 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF445P59923 1031 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 FCHO2Q0JRZ9 810 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 BTBD8Q5XKL5 378 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 DENND1BQ6P3S1 775 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 KIAA2013Q8IYS2 634 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 SCML4Q8N228 414 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 ZNF276Q8N554 614 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 TTC16Q8NEE8 873 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 CSGALNACT1Q8TDX6 532 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 SH3RF2Q8TEC5 729 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 RSPRY1Q96DX4 576 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 SHDQ96IW2 340 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 LRRC3BQ96PB8 259 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 NOX5Q96PH1 765 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 HINFPQ9BQA5 517 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 NUP58Q9BVL2 599 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 ULBP1Q9BZM6 244 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 TRPV5Q9NQA5 729 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 CYLDQ9NQC7 956 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 GKN1Q9NS71 199 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 CLIC5Q9NZA1 410 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 PCDHGC3Q9UN70 934 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 CCL26Q9Y258 94 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 MYO10Q9HD67 2058 aa11.16□□□□□ -0.62
PTCH1-225ENST00000551845 EPHB6O15197 1021 aa11.15□□□□□ -0.62
PTCH1-225ENST00000551845 COCHO43405 550 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms