RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 UPF2Q9HAU5 1272 aaKnown RBP10.27□□□□□ -0.77
GABRB3-205ENST00000545868 EBF1Q9UH73 591 aa10.27□□□□□ -0.77
GABRB3-205ENST00000545868 CDH9Q9ULB4 789 aa10.27□□□□□ -0.77
GABRB3-205ENST00000545868 PCDHGA11Q9Y5H2 935 aa10.27□□□□□ -0.77
GABRB3-205ENST00000545868 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 BAHCC1Q9P281 2608 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 BCLAF3A2AJT9 711 aaKnown RBP10.26□□□□□ -0.77
GABRB3-205ENST00000545868 F8VP50 259 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 LEFTY2O00292 366 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 GIPC1O14908 333 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 TGFB1I1O43294 461 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 KCNK5O95279 499 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 CST3P01034 146 aaPredicted RBP10.26□□□□□ -0.77
GABRB3-205ENST00000545868 PDGFRBP09619 1106 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 HDCP19113 662 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 WARSP23381 471 aaKnown RBP10.26□□□□□ -0.77
GABRB3-205ENST00000545868 SHC2P98077 582 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 PSMD2Q13200 908 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 KCNB1Q14721 858 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 SLC39A14Q15043 492 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 MDH1BQ5I0G3 518 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 PMS2CLQ68D20 193 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 CCDC73Q6ZRK6 1079 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 EPM2AIP1Q7L775 607 aaPredicted RBP10.26□□□□□ -0.77
GABRB3-205ENST00000545868 RASSF3Q86WH2 238 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 MDGA1Q8NFP4 955 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 ANKRD36BP1Q96IX9 119 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 EDEM2Q9BV94 578 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 VPS45Q9NRW7 570 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 HSPBP1Q9NZL4 362 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 MAGEC2Q9UBF1 373 aaPredicted RBP10.26□□□□□ -0.77
GABRB3-205ENST00000545868 MTMR6Q9Y217 621 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 CABIN1Q9Y6J0 2220 aa10.26□□□□□ -0.77
GABRB3-205ENST00000545868 LNP1A1A4G5 178 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ZNF840PA6NDX5 716 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 PATE3B3GLJ2 98 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 NFATC1O95644 943 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 OAS1P00973 400 aaKnown RBP10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CASP1P29466 404 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 GRIK1P39086 918 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 TXLNAP40222 546 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 SLC6A11P48066 632 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 NASPP49321 788 aaPredicted RBP10.25□□□□□ -0.77
GABRB3-205ENST00000545868 DGKEP52429 567 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 NOP14P78316 857 aaKnown RBP10.25□□□□□ -0.77
GABRB3-205ENST00000545868 SLC7A9P82251 487 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 AMPD2Q01433 879 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CYP27A1Q02318 531 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CREB5Q02930 508 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 EHHADHQ08426 723 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 DPYDQ12882 1025 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 C2orf27AQ580R0 203 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 RNF43Q68DV7 783 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 PSAPL1Q6NUJ1 521 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 VSTM1Q6UX27 236 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 C4orf50Q6ZRC1 276 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 DENND5BQ6ZUT9 1274 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 DPH6Q7L8W6 267 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 TRAPPC11Q7Z392 1133 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 FILIP1Q7Z7B0 1213 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 WDR49Q8IV35 697 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CCDC33Q8N5R6 958 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 FRMD1Q8N878 549 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 FSIP1Q8NA03 581 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 MYCBPAPQ8TBZ2 947 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 DDX1Q92499 740 aaKnown RBP10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ACDQ96AP0 544 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ELMO3Q96BJ8 720 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 TRIM9Q9C026 710 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ZNF518BQ9C0D4 1074 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ZDHHC4Q9NPG8 344 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 KBTBD4Q9NVX7 518 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 SMPD4Q9NXE4 827 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 ANGPTL2Q9UKU9 493 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CPQQ9Y646 472 aa10.25□□□□□ -0.77
GABRB3-205ENST00000545868 CELSR3Q9NYQ7 3312 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 BPTFQ12830 3046 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 ZNF233A6NK53 670 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 C4orf47A7E2U8 309 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 CLDN5O00501 218 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 CDX4O14627 284 aaPredicted RBP10.24□□□□□ -0.77
GABRB3-205ENST00000545868 CAVIN2O95810 425 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 ADH1CP00326 375 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 TNNC2P02585 160 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 SCTRP47872 440 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 TAF10Q12962 218 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 MYO1EQ12965 1108 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 DHCR24Q15392 516 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
GABRB3-205ENST00000545868 DUOXA2Q1HG44 320 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 EMC10Q5UCC4 262 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 ANO7Q6IWH7 933 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 CCDC65Q8IXS2 484 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 ADGRG2Q8IZP9 1017 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 LINC00301Q8NCQ3 95 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 TSTD1Q8NFU3 115 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 OLIG1Q8TAK6 271 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 PLEKHO2Q8TD55 490 aa10.24□□□□□ -0.77
GABRB3-205ENST00000545868 WBP2Q969T9 261 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms