RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 TRIM9Q9C026 710 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
COPS7A-211ENST00000540408 ZDHHC4Q9NPG8 344 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 KBTBD4Q9NVX7 518 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
COPS7A-211ENST00000540408 UBE4BO95155 1302 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 ATXN2Q99700 1313 aaKnown RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 HOXC11O43248 304 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 TOP3BO95985 862 aaKnown RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SYPP08247 313 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SERPINF2P08697 491 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 HOXD13P35453 343 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 AP3M2P53677 418 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SLC5A3P53794 718 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 MYL6P60660 151 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SIM1P81133 766 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 GOLGA8FQ08AF8 430 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 GOLGA8DPQ0D2H9 430 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SEMA3BQ13214 749 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 BIRC3Q13489 604 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 PEAR1Q5VY43 1037 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 KIAA1211LQ6NV74 962 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 EPM2AIP1Q7L775 607 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 NELFCDQ8IXH7 590 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 TERB1Q8NA31 727 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 ZCCHC14Q8WYQ9 949 aaKnown RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 GATA6Q92908 595 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 SMARCD1Q96GM5 515 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 DUSP9Q99956 384 aaKnown RBP13.23□□□□□ -0.29
COPS7A-211ENST00000540408 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 MSRB2Q9Y3D2 182 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 NME7Q9Y5B8 376 aa13.23□□□□□ -0.29
COPS7A-211ENST00000540408 CFAP47Q6ZTR5 3102 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 SPTLC2O15270 562 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 HYAL3O43820 417 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 EXOC3O60645 756 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 NDUFS2O75306 463 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 AP1G2O75843 785 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 IRF1P10914 325 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 P4HA1P13674 534 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 GABRG2P18507 467 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF699Q32M78 642 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF667Q5HYK9 610 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 SYCP2LQ5T4T6 812 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 GRAMD4Q6IC98 578 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 FAM35AQ86V20 835 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 TMEM25Q86YD3 366 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ETFBKMTQ8IXQ9 262 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 CHPFQ8IZ52 775 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 DEFB119Q8N690 84 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 SCAMP5Q8TAC9 235 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 SCFD1Q8WVM8 642 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF516Q92618 1163 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 DHX58Q96C10 678 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ZFRQ96KR1 1074 aaKnown RBP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 ZNF396Q96N95 335 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 CCSER2Q9H7U1 834 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 TLR8Q9NR97 1041 aaKnown RBP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 WDR35Q9P2L0 1181 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 LSM7Q9UK45 103 aaKnown RBP13.22□□□□□ -0.29
COPS7A-211ENST00000540408 STARD13Q9Y3M8 1113 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 LAMA1P25391 3075 aa13.22□□□□□ -0.29
COPS7A-211ENST00000540408 SRRM3A6NNA2 597 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 TLR5O60602 858 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 PPP6R2O75170 966 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 GNSP15586 552 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 ATP5C1P36542 298 aaKnown RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 WASP42768 502 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 CDH8P55286 799 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 CNNM4Q6P4Q7 775 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 UNC13DQ70J99 1090 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 HTR3DQ70Z44 454 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 PIP4P1Q86T03 277 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 RGL4Q8IZJ4 473 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 LINC00301Q8NCQ3 95 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 GOLGA5Q8TBA6 731 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 C7orf25Q9BPX7 421 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 TMEM121BQ9BXQ6 578 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 XYLT2Q9H1B5 865 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 FAM124BQ9H5Z6 455 aaPredicted RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 VRTNQ9H8Y1 702 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 MAGEF1Q9HAY2 307 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 DNAJC17Q9NVM6 304 aaKnown RBP13.21□□□□□ -0.29
COPS7A-211ENST00000540408 IL37Q9NZH6 218 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 GMIPQ9P107 970 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 CALCOCO1Q9P1Z2 691 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 SUSD2Q9UGT4 822 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 PCDHB9Q9Y5E1 797 aa13.21□□□□□ -0.29
COPS7A-211ENST00000540408 PTPRDP23468 1912 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms