RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 SFTPA1Q8IWL2 248 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TERB1Q8NA31 727 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KDF1Q8NAX2 398 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SCFD1Q8WVM8 642 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 XPO6Q96QU8 1125 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 B3GNT5Q9BYG0 378 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SPHK2Q9NRA0 654 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CGNQ9P2M7 1197 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CHORDC1Q9UHD1 332 aaPredicted RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SLC6A14Q9UN76 642 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FAM208BQ5VWN6 2430 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 H0Y626 953 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SPTLC2O15270 562 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HOXC11O43248 304 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ADAM23O75077 832 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF217O75362 1048 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TULP3O75386 442 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 AP1G2O75843 785 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TRIM16O95361 564 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NTSR1P30989 418 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 AP3M2P53677 418 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 BBS7Q8IWZ6 715 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CHPFQ8IZ52 775 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF507Q8TCN5 953 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF396Q96N95 335 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FBXO44Q9H4M3 255 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SMYD3Q9H7B4 428 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CCSER2Q9H7U1 834 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MAGEF1Q9HAY2 307 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TMEM74BQ9NUR3 256 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DNAJC17Q9NVM6 304 aaKnown RBP13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 COMMD8Q9NX08 183 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GMIPQ9P107 970 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CALCOCO1Q9P1Z2 691 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MBD1Q9UIS9 605 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PILRBQ9UKJ0 227 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NEUROG3Q9Y4Z2 214 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PLXND1Q9Y4D7 1925 aa13.74□□□□□ -0.21
TNFRSF1A-207ENST00000535958 A0A0A0MRY4 1105 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HYAL3O43820 417 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NDUFS2O75306 463 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TOP3BO95985 862 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SYPP08247 313 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 WASP42768 502 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NASPP49321 788 aaPredicted RBP13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZNF33AQ06730 810 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MESP2Q0VG99 397 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 UNC13DQ70J99 1090 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DEFB119Q8N690 84 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FRMD1Q8N878 549 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GOLGA5Q8TBA6 731 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 BBS2Q9BXC9 721 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.73□□□□□ -0.213e-10■■■■■ 130.4
TNFRSF1A-207ENST00000535958 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TMEM30AQ9NV96 361 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CYP8B1Q9UNU6 501 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NME7Q9Y5B8 376 aa13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TNRC6BQ9UPQ9 1833 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MYOFQ9NZM1 2061 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SPAARA0A1B0GVQ0 90 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TGFB1I1O43294 461 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 STX6O43752 255 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TLR5O60602 858 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PPP6R2O75170 966 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SERPINF2P08697 491 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GABRG2P18507 467 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HOXD13P35453 343 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 NCOA4Q13772 614 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 HNRNPDQ14103 355 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 E2F4Q16254 413 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SYCP2LQ5T4T6 812 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SNX30Q5VWJ9 437 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PEAR1Q5VY43 1037 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 EPM2AIP1Q7L775 607 aaPredicted RBP13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ETFBKMTQ8IXQ9 262 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PHTF2Q8N3S3 785 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MINDY1Q8N5J2 469 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 LINC00301Q8NCQ3 95 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SCAMP5Q8TAC9 235 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 GATA6Q92908 595 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZFRQ96KR1 1074 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 DNAI2Q9GZS0 605 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FOXD4L1Q9NU39 408 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 WDR35Q9P2L0 1181 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 TFIP11Q9UBB9 837 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 SUSD2Q9UGT4 822 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 MTMR6Q9Y217 621 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 CACNA1GO43497 2377 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 FRYQ5TBA9 3013 aa13.72□□□□□ -0.21
TNFRSF1A-207ENST00000535958 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms