RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 IRX4P78413 519 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 TSPY1Q01534 308 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 POU5F1Q01860 360 aaKnown RBP11.84□□□□□ -0.51
CSMD1-210ENST00000521646 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 LARP1BQ659C4 914 aaKnown RBP11.84□□□□□ -0.51
CSMD1-210ENST00000521646 RNF43Q68DV7 783 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 ANO7Q6IWH7 933 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 OLIG1Q8TAK6 271 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 ZNF560Q96MR9 790 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
CSMD1-210ENST00000521646 ARHGAP26Q9UNA1 814 aa11.84□□□□□ -0.51
CSMD1-210ENST00000521646 PCDH15Q96QU1 1955 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 ATRXP46100 2492 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 ZNF840PA6NDX5 716 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 CLDN5O00501 218 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 GCNT3O95395 438 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 NEFLP07196 543 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 KRT19P08727 400 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PDGFRBP09619 1106 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 USP17L7P0C7H9 530 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 TCF3P15923 654 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 RHOQP17081 205 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 SCP2P22307 547 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PTGER3P43115 390 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
CSMD1-210ENST00000521646 DGKEP52429 567 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PSMD2Q13200 908 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 NFE2Q16621 373 aaPredicted RBP11.83□□□□□ -0.52
CSMD1-210ENST00000521646 FILIP1Q7Z7B0 1213 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 MIB1Q86YT6 1006 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 VWA5B2Q8N398 1253 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 CPA6Q8N4T0 437 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 ALLCQ8N6M5 410 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 TOP6BLQ8N6T0 577 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 IL17RCQ8NAC3 791 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 HVCN1Q96D96 273 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PCED1BQ96HM7 432 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 SYT15Q9BQS2 421 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 TTLL2Q9BWV7 592 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 TMEM206Q9H813 350 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 CD93Q9NPY3 652 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 OLFML3Q9NRN5 406 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 INTS13Q9NVM9 706 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 SMPD4Q9NXE4 827 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 ITGA11Q9UKX5 1188 aa11.83□□□□□ -0.52
CSMD1-210ENST00000521646 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
CSMD1-210ENST00000521646 PLXND1Q9Y4D7 1925 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CDC14CA4D256 554 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 F8VP50 259 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 TGFB1I1O43294 461 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 HUS1O60921 280 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ATG13O75143 517 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 OAS1P00973 400 aaKnown RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 HDCP19113 662 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 GARTP22102 1010 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CASP1P29466 404 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 PNPLA4P41247 253 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 MAGEA11P43364 429 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 KIR2DL1P43626 348 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 IFNAR2P48551 515 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 RPL10AP62906 217 aaKnown RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CRY1Q16526 586 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 SH3PXD2AQ5TCZ1 1133 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CC2D1AQ6P1N0 951 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 RHBDF2Q6PJF5 856 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 NT5DC4Q86YG4 428 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 SPATA2LQ8IUW3 424 aaPredicted RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ADGRG2Q8IZP9 1017 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 TMEM86AQ8N2M4 240 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 NOC3LQ8WTT2 800 aaKnown RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 GATA6Q92908 595 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ATP2A3Q93084 1043 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ERLEC1Q96DZ1 483 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ACCSQ96QU6 501 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 USP28Q96RU2 1077 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 CD248Q9HCU0 757 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 ZMIZ1Q9ULJ6 1067 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 MMP17Q9ULZ9 603 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 SMC3Q9UQE7 1217 aa11.82□□□□□ -0.52
CSMD1-210ENST00000521646 SRPRBQ9Y5M8 271 aaKnown RBP11.82□□□□□ -0.52
CSMD1-210ENST00000521646 PI4KAP42356 2102 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 BPTFQ12830 3046 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 FAM181BA6NEQ2 426 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 PROS1P07225 676 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 IDEP14735 1019 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 GBP1P32455 592 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 FAM193AP78312 1265 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 RBP5P82980 135 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 MYL7Q01449 175 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 ZNF252P-AS1Q0IIN9 211 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 CUL4AQ13619 759 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 POSTNQ15063 836 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 DHCR24Q15392 516 aa11.81□□□□□ -0.52
CSMD1-210ENST00000521646 MAP7D1Q3KQU3 841 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms