RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 PCSK1P29120 753 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 KCNJ1P48048 391 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 EIF3BP55884 814 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 DHX9Q08211 1270 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 BFSP2Q13515 415 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 TAZQ16635 292 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 TIGD5Q53EQ6 642 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 GLB1LQ6UWU2 654 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 RTN4RL1Q86UN2 441 aaPredicted RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 ATL2Q8NHH9 583 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 TLCD1Q96CP7 247 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 SYT15Q9BQS2 421 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 MCM8Q9UJA3 840 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 CDH9Q9ULB4 789 aa19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 R3HDM2Q9Y2K5 976 aaKnown RBP19.36■□□□□ 0.69
TSPAN4-212ENST00000494815 DCDC2CA8MYV0 355 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 TRUB2O95900 331 aaKnown RBP19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 GAS8O95995 478 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 CYP11A1P05108 521 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 SDC4P31431 198 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 SCTRP47872 440 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 CCDC14Q49A88 953 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 DRICH1Q6PGQ1 229 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 FAM126BQ8IXS8 530 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 CMASQ8NFW8 434 aaPredicted RBP19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 SGSM3Q96HU1 749 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 B3GNT5Q9BYG0 378 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 DSEQ9UL01 958 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 PTPN22Q9Y2R2 807 aa19.35■□□□□ 0.69
TSPAN4-212ENST00000494815 ARHGEF37A1IGU5 675 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PPFIA2O75334 1257 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 GRAP2O75791 330 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KRT10P13645 584 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 IBSPP21815 317 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PPARDQ03181 441 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 SNX1Q13596 522 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PPP1R7Q15435 360 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 SMTNL2Q2TAL5 461 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 MDH1BQ5I0G3 518 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PAQR9Q6ZVX9 377 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PIGZQ86VD9 579 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 MAGEC3Q8TD91 643 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KCTD13Q8WZ19 329 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 CENPTQ96BT3 561 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 ACSF2Q96CM8 615 aaPredicted RBP19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 CRTAC1Q9NQ79 661 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 ZDHHC18Q9NUE0 388 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 TDRD15B5MCY1 1934 aaKnown RBP19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 M0QZQ0 153 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 COL6A1P12109 1028 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 DRD4P21917 467 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KDELR1P24390 212 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PTPN9P43378 593 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 TAF5Q15542 800 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KCNT1Q5JUK3 1230 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 DCLRE1AQ6PJP8 1040 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 CPLX4Q7Z7G2 160 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 METTL23Q86XA0 190 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 GIMAP7Q8NHV1 300 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 LINC01599Q8WXQ3 324 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 FMO2Q99518 471 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 TXLNGYQ9BZA5 131 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 KDM4CQ9H3R0 1056 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 HAUS2Q9NVX0 235 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 PCSK1NQ9UHG2 260 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 SNX24Q9Y343 169 aa19.34■□□□□ 0.69
TSPAN4-212ENST00000494815 CCDC189A1A4V9 331 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 PRPSAP2O60256 369 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 FAM200BP0CF97 657 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 RPL21P46778 160 aaKnown RBP19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 LMNB2Q03252 620 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 KRT17Q04695 432 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 ADCY2Q08462 1091 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 XRCC4Q13426 336 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 PTK6Q13882 451 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 C15orf59Q2T9L4 293 aaPredicted RBP19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 KAZNQ674X7 775 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 CCT6BQ92526 530 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 CFAP57Q96MR6 1250 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 GRHL1Q9NZI5 618 aa19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 TIMM13Q9Y5L4 95 aaPredicted RBP19.33■□□□□ 0.69
TSPAN4-212ENST00000494815 PITPNM1O00562 1244 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 LCP1P13796 627 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 IFFO1Q0D2I5 559 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 EFHC1Q5JVL4 640 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 ERMARDQ5T6L9 678 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 CD300LGQ6UXG3 332 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 CLEC20AQ6ZU45 233 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 TBCBQ99426 244 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 MED10Q9BTT4 135 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 BEGAINQ9BUH8 593 aa19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 FRMD8P1Q9BZ68 369 aaPredicted RBP19.33■□□□□ 0.68
TSPAN4-212ENST00000494815 CLDN5O00501 218 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 DNAJC8O75937 253 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CCDC142Q17RM4 750 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 BOLA3Q53S33 107 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 SH3PXD2AQ5TCZ1 1133 aa19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 CYP4V2Q6ZWL3 525 aaPredicted RBP19.32■□□□□ 0.68
TSPAN4-212ENST00000494815 HOOK3Q86VS8 718 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms