RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 PLEKHA4Q9H4M7 779 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 NRDE2Q9H7Z3 1164 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 POPDC2Q9HBU9 364 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 NGRNQ9NPE2 291 aaKnown RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 DMAP1Q9NPF5 467 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 ZDHHC18Q9NUE0 388 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 GRHL1Q9NZI5 618 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 R3HDM2Q9Y2K5 976 aaKnown RBP12.22□□□□□ -0.45
GGPS1-205ENST00000482013 NEU2Q9Y3R4 380 aa12.22□□□□□ -0.45
GGPS1-205ENST00000482013 MICAL3Q7RTP6 2002 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 OR6C75A6NL08 312 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 OPA1O60313 960 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CST8O60676 142 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 TADA2AO75478 443 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 F9P00740 461 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 APOC2P02655 101 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAM153BP0C7A2 387 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ZFXP17010 805 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 OR1G1P47890 313 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 VCPP55072 806 aaKnown RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CDH6P55285 790 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 HDAC4P56524 1084 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ATP11AP98196 1134 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 TLE2Q04725 743 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SMARCB1Q12824 385 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SNX1Q13596 522 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 MRPL58Q14197 206 aaKnown RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 TAF5Q15542 800 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 TRADDQ15628 312 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 OASLQ15646 514 aaKnown RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 DPYSL2Q16555 572 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 NFE2Q16621 373 aaPredicted RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CDO1Q16878 200 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SMTNL2Q2TAL5 461 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAM153CQ494X1 144 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 HSP90B2PQ58FF3 399 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CFAP58Q5T655 872 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SH3PXD2AQ5TCZ1 1133 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 KAZNQ674X7 775 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CNKSR3Q6P9H4 555 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CEP128Q6ZU80 1094 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ZNF365Q70YC5 407 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 DDX42Q86XP3 938 aaKnown RBP eCLIP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 IQCKQ8N0W5 287 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 DEFB106AQ8N104 65 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SLC35B2Q8TB61 432 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 CLEC4CQ8WTT0 213 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 HSPH1Q92598 858 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAM149B1Q96BN6 582 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAF2Q96CS3 445 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SNF8Q96H20 258 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 RNF157Q96PX1 679 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 NPY6RQ99463 290 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FMO2Q99518 471 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ZNF670Q9BS34 389 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ULBP1Q9BZM6 244 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ZCWPW1Q9H0M4 648 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAM153AQ9UHL3 310 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 ADAM28Q9UKQ2 775 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 FAN1Q9Y2M0 1017 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SNX24Q9Y343 169 aa12.21□□□□□ -0.45
GGPS1-205ENST00000482013 SCN5AQ14524 2016 aa12.21□□□□□ -0.46
GGPS1-205ENST00000482013 COL4A4P53420 1690 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 GOLGA6BA6NDN3 693 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 I3L4J1 428 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 NRP1O14786 923 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 B4GALT3O60512 393 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 PPFIA2O75334 1257 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ZBED1O96006 694 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 LTFP02788 710 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ITGB1P05556 798 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TGM2P21980 687 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 BDNFP23560 247 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 IVDP26440 423 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 STIP1P31948 543 aaKnown RBP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 MAGEA11P43364 429 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 GJA8P48165 433 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ZNF135P52742 658 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 IKBKEQ14164 716 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 DPYSL3Q14195 570 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 KRT81Q14533 505 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 SLMAPQ14BN4 828 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 TRIM60Q495X7 471 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
GGPS1-205ENST00000482013 KCNT1Q5JUK3 1230 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 SCYL2Q6P3W7 929 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 VSTM1Q6UX27 236 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 ZDHHC24Q6UX98 284 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
GGPS1-205ENST00000482013 SPATA2LQ8IUW3 424 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms