RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 RCN1Q15293 331 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 TRIP13Q15645 432 aaPredicted RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 ZC3H12AQ5D1E8 599 aaKnown RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 HHATQ5VTY9 493 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 LRRC74BQ6ZQY2 392 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 TLK2Q86UE8 772 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 UCMAQ8WVF2 138 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 UPF3AQ9H1J1 476 aaKnown RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 SLC24A2Q9UI40 661 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 CPSF3Q9UKF6 684 aaKnown RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 GRID1Q9ULK0 1009 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 TYROBPO43914 113 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 MYL6P60660 151 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 LAMB3Q13751 1172 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 SURF1Q15526 300 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 ZBTB33Q86T24 672 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 ZNF75CPQ92670 426 aaPredicted RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 PAWRQ96IZ0 340 aaKnown RBP22.09■■□□□ 1.13
SH3D21-202ENST00000474766 TCHPQ9BT92 498 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 MTMR12Q9C0I1 747 aa22.09■■□□□ 1.13
SH3D21-202ENST00000474766 DNAJC6O75061 913 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 PSMG1O95456 288 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 CALB1P05937 261 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 CACNA2D1P54289 1103 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 GJA9P57773 515 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 RPL7AP62424 266 aaKnown RBP22.08■■□□□ 1.13
SH3D21-202ENST00000474766 DUOXA2Q1HG44 320 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 SDCCAG8Q86SQ7 713 aaPredicted RBP22.08■■□□□ 1.13
SH3D21-202ENST00000474766 EXOC8Q8IYI6 725 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 ITFG2Q969R8 447 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 PTCD3Q96EY7 689 aaKnown RBP22.08■■□□□ 1.13
SH3D21-202ENST00000474766 PWWP2AQ96N64 755 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 GPR20Q99678 358 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 NIF3L1Q9GZT8 377 aa22.08■■□□□ 1.13
SH3D21-202ENST00000474766 DDX43Q9NXZ2 648 aaKnown RBP22.08■■□□□ 1.13
SH3D21-202ENST00000474766 A8MXQ7 604 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 NDC80O14777 642 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 GSC2O15499 205 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 PRKCBP05771 671 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CA4P22748 312 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 PROZP22891 400 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 KLRC2P26717 231 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 RPA3P35244 121 aaPredicted RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 ARHGAP1Q07960 439 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 MAPK6Q16659 721 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CCDC142Q17RM4 750 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CELF3Q5SZQ8 465 aaKnown RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 LRRC38Q5VT99 294 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 PLPPR4Q7Z2D5 763 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 MTDHQ86UE4 582 aaKnown RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 RCOR2Q8IZ40 523 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 ARRDC4Q8NCT1 418 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 KLHDC9Q8NEP7 349 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 NRG4Q8WWG1 115 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 PTPRN2Q92932 1015 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 ZNF518BQ9C0D4 1074 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 DMAP1Q9NPF5 467 aaPredicted RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 FETUBQ9UGM5 382 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 USTQ9Y2C2 406 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 DYNC1LI2O43237 492 aaPredicted RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 C6orf222P0C671 652 aaPredicted RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 SRGAP2CP0DJJ0 459 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 KRT15P19012 456 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CD58P19256 250 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CDH5P33151 784 aaPredicted RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 NFX1Q12986 1120 aaKnown RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 KRT72Q14CN4 511 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 RFWD3Q6PCD5 774 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 ZBTB8OSQ8IWT0 167 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 RNF149Q8NC42 400 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 NSL1Q96IY1 281 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 PTPRHQ9HD43 1115 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 CISHQ9NSE2 258 aa22.07■■□□□ 1.12
SH3D21-202ENST00000474766 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.07■■□□□ 1.12
SH3D21-202ENST00000474766 ALPK3Q96L96 1907 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 MAP3K7O43318 606 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 HAUS5O94927 633 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 BEX3Q00994 111 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 ZNF252P-AS1Q0IIN9 211 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 SLC1A5Q15758 541 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 ACSBG2Q5FVE4 666 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 FOXB2Q5VYV0 432 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 CCSAPQ6IQ19 270 aaPredicted RBP22.06■■□□□ 1.12
SH3D21-202ENST00000474766 DSTYKQ6XUX3 929 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 ARHGAP22Q7Z5H3 698 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 C2orf40Q9H1Z8 148 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 PCDHGC3Q9UN70 934 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 SLC4A7Q9Y6M7 1214 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 CAPN9O14815 690 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 COL6A1P12109 1028 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 NKX3-2P78367 333 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 HSDL1Q3SXM5 330 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 DRICH1Q6PGQ1 229 aaPredicted RBP22.06■■□□□ 1.12
SH3D21-202ENST00000474766 TSHZ1Q6ZSZ6 1077 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 RNF180Q86T96 592 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 ARHGAP24Q8N264 748 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 TMEM35BQ8NCS4 154 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 AZIN2Q96A70 460 aa22.06■■□□□ 1.12
SH3D21-202ENST00000474766 RBM41Q96IZ5 413 aaKnown RBP22.06■■□□□ 1.12
SH3D21-202ENST00000474766 Q9Y3F1 56 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms