RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 C18orf25Q96B23 403 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 DEPDC7Q96QD5 511 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 RETREG1Q9H6L5 497 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.55□□□□□ -1.363e-6■■■■■ 87
LMBR1-204ENST00000415428 FTSJ1Q9UET6 329 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 SCML2Q9UQR0 700 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 GINS2Q9Y248 185 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ANKRD6Q9Y2G4 727 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 LRRK1Q38SD2 2015 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ACACBO00763 2458 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 HHLA1C9JL84 531 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 U2AF2P26368 475 aaKnown RBP eCLIP6.55□□□□□ -1.362e-6■■■■□ 20.4
LMBR1-204ENST00000415428 AVPR1AP37288 418 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 DHPSP49366 369 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 CYP4F8P98187 520 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 NFIL3Q16649 462 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 EFHC1Q5JVL4 640 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 DCAF12L1Q5VU92 463 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PDCL2Q8N4E4 241 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ALLCQ8N6M5 410 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 TXNDC5Q8NBS9 432 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ERMNQ8TAM6 284 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 DEPTORQ8TB45 409 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 LRRC15Q8TF66 581 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 MMS19Q96T76 1030 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 BARD1Q99728 777 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 RGL1Q9NZL6 768 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 KLK14Q9P0G3 267 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 SAMM50Q9Y512 469 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PCDHGA3Q9Y5H0 932 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 MAGEC1O60732 1142 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 CTDNEP1O95476 244 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PRR29P0C7W0 189 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ADD1P35611 737 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 MEA1Q16626 185 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 GRAMD4Q6IC98 578 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 RUFY3Q7L099 469 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ZNF438Q7Z4V0 828 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 BRSK2Q8IWQ3 736 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 MYCBPAPQ8TBZ2 947 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 ZNF564Q8TBZ8 553 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PPP1R16BQ96T49 567 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PABPC3Q9H361 631 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 BMP2KQ9NSY1 1161 aaPredicted RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 CGNQ9P2M7 1197 aaKnown RBP6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PCDHA12Q9UN75 941 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PCDHB9Q9Y5E1 797 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 PCDHB6Q9Y5E3 794 aa6.55□□□□□ -1.36
LMBR1-204ENST00000415428 EIF4E1BA6NMX2 242 aaKnown RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 SRPRAP08240 638 aaKnown RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 ATICP31939 592 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 OXCT1P55809 520 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 SURF1Q15526 300 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 RAB41Q5JT25 222 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 RINT1Q6NUQ1 792 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 FILIP1Q7Z7B0 1213 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 METTL23Q86XA0 190 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 EFCAB13Q8IY85 973 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 FAM26EQ8N5C1 309 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 TTC9BQ8N6N2 239 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 ELF4Q99607 663 aaPredicted RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 LLPHQ9BRT6 129 aaKnown RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 EVA1BQ9NVM1 165 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 CACNA1EQ15878 2313 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 VPS13AQ96RL7 3174 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 LACTBL1A8MY62 500 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 MAPK13O15264 365 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 OR52Z1P0C646 297 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 PSMA5P28066 241 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 PCSK1P29120 753 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 MCM4P33991 863 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 RPL6Q02878 288 aaKnown RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 ARL6IP4Q66PJ3 421 aaKnown RBP6.54□□□□□ -1.36
LMBR1-204ENST00000415428 CCDC186Q7Z3E2 898 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 NOSTRINQ8IVI9 506 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 PLPP6Q8IY26 295 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 RASEFQ8IZ41 740 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 RILPL2Q969X0 211 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 MYO19Q96H55 970 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 CAMK1GQ96NX5 476 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 NCOR2Q9Y618 2525 aa6.54□□□□□ -1.36
LMBR1-204ENST00000415428 ADSSP30520 456 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 TPMTP51580 245 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 CYP4F3Q08477 520 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 TRIP4Q15650 581 aaPredicted RBP6.53□□□□□ -1.36
LMBR1-204ENST00000415428 CALCRLQ16602 461 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 ZNF568Q3ZCX4 644 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 HEATR6Q6AI08 1181 aaKnown RBP6.53□□□□□ -1.36
LMBR1-204ENST00000415428 C17orf82Q86X59 251 aaPredicted RBP6.53□□□□□ -1.36
LMBR1-204ENST00000415428 MICU3Q86XE3 530 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 TMEM145Q8NBT3 493 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 AK8Q96MA6 479 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 SLC46A1Q96NT5 459 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 SEMA4CQ9C0C4 833 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
LMBR1-204ENST00000415428 PCDHGB7Q9Y5F8 929 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms