RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 MOXD1Q6UVY6 613 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FBXO11Q86XK2 927 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 EXD1Q8NHP7 514 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 DCAF4Q8WV16 495 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CCDC124Q96CT7 223 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 NLRP4Q96MN2 994 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 RILPQ96NA2 401 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 TMOD2Q9NZR1 351 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 RSL24D1Q9UHA3 163 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CDH22Q9UJ99 828 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FAM86B1E9PN63 330 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 TBX3O15119 743 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FAM86B2P0C5J1 330 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 KITP10721 976 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CNGA3Q16281 694 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FNBP1LQ5T0N5 605 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 LLGL2Q6P1M3 1020 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FAM178BQ8IXR5 827 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 MCOLN2Q8IZK6 566 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 ACTRT2Q8TDY3 377 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 FAM81BQ96LP2 452 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CNBD2Q96M20 576 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 MECRQ9BV79 373 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 LIN28AQ9H9Z2 209 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 MARCOQ9UEW3 520 aaPredicted RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 PADI4Q9UM07 663 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 SORCS3Q9UPU3 1222 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 HEY1Q9Y5J3 304 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 AP4B1Q9Y6B7 739 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 GJA3Q9Y6H8 435 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 RBP3P10745 1247 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 ENTPD1P49961 510 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CDK9P50750 372 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 ACAP1Q15027 740 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CDHR3Q6ZTQ4 885 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CRYGNQ8WXF5 182 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 LENG9Q96B70 501 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 CCT7Q99832 543 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 EIF2AK1Q9BQI3 630 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 AMNQ9BXJ7 453 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 TMEM39BQ9GZU3 492 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 RRN3Q9NYV6 651 aa15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 DRG1Q9Y295 367 aaKnown RBP15.23■□□□□ 0.03
VPS9D1-201ENST00000389386 BRCA1P38398 1863 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 IQANK1A0A1B0GTG1 560 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 IPO5O00410 1097 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 CAPN15O75808 1086 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 KRT10P13645 584 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 MFAP3P55082 362 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 TMPRSS15P98073 1019 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 FAAP100Q0VG06 881 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 MYBPC2Q14324 1141 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 TGFBIQ15582 683 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 ELMSAN1Q6PJG2 1045 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 STXBP4Q6ZWJ1 553 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 PQLC1Q8N2U9 271 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 DEPTORQ8TB45 409 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 EBF4Q9BQW3 602 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 GLIS2Q9BZE0 524 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 OSBPL6Q9BZF3 934 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 SNCAIPQ9Y6H5 919 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 MATN2O00339 956 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 ZBED1O96006 694 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 EGFRP00533 1210 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 PROCP04070 461 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 FAM58BPP0C7Q3 252 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 THRAP10827 490 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 NFX1Q12986 1120 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 PTK7Q13308 1070 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 C16orf72Q14CZ0 275 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 TEX44Q53QW1 395 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNF362Q5T0B9 420 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 ATG16L1Q676U5 607 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 E2F7Q96AV8 911 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 COX4I2Q96KJ9 171 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 SRPK1Q96SB4 655 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 PCIF1Q9H4Z3 704 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 TUT1Q9H6E5 874 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 C6orf203Q9P0P8 240 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 KIAA1522Q9P206 1035 aaPredicted RBP15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 SEL1LQ9UBV2 794 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 VAV3Q9UKW4 847 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 PRR12Q9ULL5 1215 aa15.22■□□□□ 0.03
VPS9D1-201ENST00000389386 ZNF646O15015 1829 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 FBP2O00757 339 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 CFBP00751 764 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 SYCP2LQ5T4T6 812 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 OLFML1Q6UWY5 402 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 HPS6Q86YV9 775 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 FBXO36Q8NEA4 188 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 PPP4R1Q8TF05 950 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 ARPC5LQ9BPX5 153 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 MRIQ9BWK5 157 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 PSMD13Q9UNM6 376 aa15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 ASTN2O75129 1339 aaPredicted RBP15.21■□□□□ 0.03
VPS9D1-201ENST00000389386 UNGP13051 313 aaPredicted RBP15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 GJC1P36383 396 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 COPAP53621 1224 aa15.21■□□□□ 0.02
VPS9D1-201ENST00000389386 RAB15P59190 212 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms