RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 HERC4Q5GLZ8 1057 aaPredicted RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 MUM1L1Q5H9M0 696 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 KLHDC7AQ5VTJ3 777 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 SFMBT2Q5VUG0 894 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TMEM200BQ69YZ2 307 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 PPP4R3AQ6IN85 833 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 CDC42EP5Q6NZY7 148 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 LRRC31Q6UY01 552 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 LEKR1Q6ZMV7 388 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TAX1BP1Q86VP1 789 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 GPBP1Q86WP2 473 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 DNAAF5Q86Y56 855 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 CERS3Q8IU89 383 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MMGT1Q8N4V1 131 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 SPATA4Q8NEY3 305 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TRIM58Q8NG06 486 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 AFAP1L1Q8TED9 768 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TBC1D22AQ8WUA7 517 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 CUL5Q93034 780 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MTMR8Q96EF0 704 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 RPGRIP1Q96KN7 1286 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 RNPC3Q96LT9 517 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.03□□□□□ -1.76
SMC6-202ENST00000381272 LRRC27Q9C0I9 530 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 KLC2Q9H0B6 622 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 PCIF1Q9H4Z3 704 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 PSTPIP2Q9H939 334 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 MED4Q9NPJ6 270 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 INTS7Q9NVH2 962 aaKnown RBP4.03□□□□□ -1.76
SMC6-202ENST00000381272 SERPINB13Q9UIV8 391 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 NR2E1Q9Y466 385 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 TCAF1Q9Y4C2 921 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 LTBP4Q8N2S1 1624 aa4.03□□□□□ -1.76
SMC6-202ENST00000381272 FAM170AA1A519 330 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ANKRD65E5RJM6 399 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 hCG_1984214I3L0E3 225 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZBTB5O15062 677 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PJA2O43164 708 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PALMO75781 387 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FTCDO95954 541 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CYP17A1P05093 508 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SERPING1P05155 500 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ACTN1P12814 892 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 EEF2P13639 858 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CR2P20023 1033 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PAFAH1B1P43034 410 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PSMC6P62333 389 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FKBP3Q00688 224 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 ALDH6A1Q02252 535 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 RAPGEF1Q13905 1077 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PTPROQ16827 1216 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 KCTD19Q17RG1 926 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 QRICH1Q2TAL8 776 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ASTE1Q2TB18 679 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZCWPW2Q504Y3 356 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 FAM83BQ5T0W9 1011 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CCDC181Q5TID7 509 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 AGBL4Q5VU57 503 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 TRIM68Q6AZZ1 485 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 CCDC70Q6NSX1 233 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 TCTN3Q6NUS6 607 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 LARP4Q71RC2 724 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC6-202ENST00000381272 RTN4RL1Q86UN2 441 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CCDC65Q8IXS2 484 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 C10orf67Q8IYJ2 551 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ANKRD13AQ8IZ07 590 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 RTKN2Q8IZC4 609 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ZNF713Q8N859 430 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 AENQ8WTP8 325 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 TBC1D5Q92609 795 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 IQCDQ96DY2 449 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ALS2CR12Q96Q35 445 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 P2RX7Q99572 595 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 FOXB1Q99853 325 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 TLR10Q9BXR5 811 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PACSIN1Q9BY11 444 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 KIAA1683Q9H0B3 1180 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 SEMA4AQ9H3S1 761 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 RABEP2Q9H5N1 569 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 VIPAS39Q9H9C1 493 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 RBM12Q9NTZ6 932 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CWC15Q9P013 229 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 RSPH14Q9UHP6 348 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 OAZ3Q9UMX2 235 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PACSIN2Q9UNF0 486 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 TSC22D4Q9Y3Q8 395 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 HYOU1Q9Y4L1 999 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PCDHA1Q9Y5I3 950 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC6-202ENST00000381272 UBR3Q6ZT12 1888 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 PLIN4Q96Q06 1357 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 ABCB11O95342 1321 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 A0A087X0T9 212 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 GOLGA6BA6NDN3 693 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 DDTLA6NHG4 134 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 CBX4O00257 560 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 POLRMTO00411 1230 aaKnown RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 TOM1O60784 492 aa4.02□□□□□ -1.77
SMC6-202ENST00000381272 MAFO75444 373 aaPredicted RBP4.02□□□□□ -1.77
SMC6-202ENST00000381272 HLA-DOAP06340 250 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms