RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 MCM8Q9UJA3 840 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 ACOT9Q9Y305 439 aa17.27■□□□□ 0.35
NID1-202ENST00000366595 E2F8A0AVK6 867 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ZBTB22O15209 634 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 EXTL3O43909 919 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 TADA2AO75478 443 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 TNFRSF21O75509 655 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CPA3P15088 417 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 HPGDP15428 266 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 MCL1Q07820 350 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 NDUFAF6Q330K2 333 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 FBXO36Q8NEA4 188 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 REEP2Q9BRK0 252 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 MROH7Q68CQ1 1323 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CFAP43Q8NDM7 1665 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 KIF28PB7ZC32 967 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 KLRC1P26715 233 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 NYAP1Q6ZVC0 841 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 DHFR2Q86XF0 187 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 APOBEC3FQ8IUX4 373 aaKnown RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 C1orf131Q8NDD1 294 aaKnown RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 FNIP1Q8TF40 1166 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ADI1Q9BV57 179 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 POLD4Q9HCU8 107 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 TSPAN9O75954 239 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 XRCC4Q13426 336 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ZNF512Q96ME7 567 aaPredicted RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 EFCAB10A6NFE3 127 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 PRKAA1Q13131 559 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ULK2Q8IYT8 1036 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 GDPD5Q8WTR4 605 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 PDCD10Q9BUL8 212 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 FUT8Q9BYC5 575 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CROTQ9UKG9 612 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 GSTK1Q9Y2Q3 226 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ADGRL2O95490 1459 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 VPS4BO75351 444 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 GYPCP04921 128 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 MPOP05164 745 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CCNA2P20248 432 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 BNC1Q01954 994 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 DCAF6Q58WW2 860 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 TDRD5Q8NAT2 981 aaKnown RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 DLG3Q92796 817 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 CYLDQ9NQC7 956 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 ZNF624Q9P2J8 865 aaPredicted RBP17.26■□□□□ 0.35
NID1-202ENST00000366595 KIAA1257Q9ULG3 409 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 SH3GLB1Q9Y371 365 aa17.26■□□□□ 0.35
NID1-202ENST00000366595 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 ZNF521Q96K83 1311 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 TPBGLP0DKB5 382 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 VCLP18206 1134 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 MSH3P20585 1137 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 TGFBR2P37173 567 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 C11orf96Q7Z7L8 435 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 TRIM48Q8IWZ4 208 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 CCDC33Q8N5R6 958 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 UTP15Q8TED0 518 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 ATXN2LQ8WWM7 1075 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 FAM210AQ96ND0 272 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 PHF20Q9BVI0 1012 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 EPB41L4BQ9H329 900 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 AHSPQ9NZD4 102 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 CNOT7Q9UIV1 285 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 SMNDC1O75940 238 aaKnown RBP eCLIP17.25■□□□□ 0.35
NID1-202ENST00000366595 F9P00740 461 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 LGALS3BPQ08380 585 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 EPS8L3Q8TE67 593 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 BTBD10Q9BSF8 475 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.25■□□□□ 0.35
NID1-202ENST00000366595 TRIM10Q9UDY6 481 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 ATP7BP35670 1465 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 RPS6KA5O75582 802 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 GARTP22102 1010 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 YY1P25490 414 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 PGS1Q32NB8 556 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 RNASE11Q8TAA1 199 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 SLITRK1Q96PX8 696 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 EMILIN2Q9BXX0 1053 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.25■□□□□ 0.35
NID1-202ENST00000366595 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 TUBA8Q9NY65 449 aaPredicted RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 UBOX5O94941 541 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 SKIV2L2P42285 1042 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 DEFB107AQ8IZN7 70 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 DHRSXQ8N5I4 330 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 PAFAH2Q99487 392 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
NID1-202ENST00000366595 C15orf41Q9Y2V0 281 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 NCAPD2Q15021 1401 aa17.25■□□□□ 0.35
NID1-202ENST00000366595 UBE2QL1A1L167 161 aa17.24■□□□□ 0.35
NID1-202ENST00000366595 ITGALP20701 1170 aa17.24■□□□□ 0.35
NID1-202ENST00000366595 ACOT2P49753 483 aa17.24■□□□□ 0.35
NID1-202ENST00000366595 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
NID1-202ENST00000366595 DDX39BQ13838 428 aaKnown RBP17.24■□□□□ 0.35
NID1-202ENST00000366595 DGKDQ16760 1214 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms