RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 PCDHB8Q9UN66 801 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 TRIP11Q15643 1979 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 TTC3P53804 2025 aa11.26□□□□□ -0.61
TRAPPC4-201ENST00000359005 C5orf42Q9H799 3197 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 CASTOR2A6NHX0 329 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 H3BQ06 376 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 TNFRSF10AO00220 468 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 SYN3O14994 580 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 TADA2AO75478 443 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 ECEL1O95672 775 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 RB1P06400 928 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 KCNA5P22460 613 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 PTPN9P43378 593 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 RPL34P49207 117 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 CAV1Q03135 178 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 HYAL1Q12794 435 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 SMARCB1Q12824 385 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 MTMR3Q13615 1198 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 COL19A1Q14993 1142 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCNG2Q16589 344 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 NFE2Q16621 373 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 C2CD6Q53TS8 623 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 SCARA3Q6AZY7 606 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 OVOS1Q6IE37 1185 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM183BPQ6ZVS7 135 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 KLHL23Q8NBE8 558 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 KCTD6Q8NC69 237 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 ATL2Q8NHH9 583 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 TEKT4Q8WW24 435 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 SLCO2A1Q92959 643 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 SAMD11Q96NU1 681 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 RUFY1Q96T51 708 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 TMEM175Q9BSA9 504 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 OSBPL8Q9BZF1 889 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 PNPLA8Q9NP80 782 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 OGFRQ9NZT2 677 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 CHORDC1Q9UHD1 332 aaPredicted RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 TDRD15B5MCY1 1934 aaKnown RBP11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 MICAL3Q7RTP6 2002 aa11.25□□□□□ -0.61
TRAPPC4-201ENST00000359005 C2CD4BA6NLJ0 364 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 TBKBP1A7MCY6 615 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 MEIS3P2A8K0S8 358 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZNF487B1APH4 448 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 H7C4K7 107 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 LINC01565O15544 149 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 RAD51CO43502 376 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 ALDH2P05091 517 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCDC130P13994 396 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 ZFXP17010 805 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 LMO2P25791 158 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 COILP38432 576 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 AIF1P55008 147 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 YWHAHQ04917 246 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CALCOCO2Q13137 446 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 PPP1R7Q15435 360 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 MDH1BQ5I0G3 518 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CLLU1OSQ5K130 101 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 BEND6Q5SZJ8 279 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 DCAF12L1Q5VU92 463 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 PMF1Q6P1K2 205 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.613e-8■■□□□ 12.3
TRAPPC4-201ENST00000359005 TTC30AQ86WT1 665 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 PSTKQ8IV42 348 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CMTR2Q8IYT2 770 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 KRT222Q8N1A0 295 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CCDC89Q8N998 374 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 RXFP2Q8WXD0 754 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 IFT81Q8WYA0 676 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 IRGQQ8WZA9 623 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CASD1Q96PB1 797 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 FERMT1Q9BQL6 677 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 ERP44Q9BS26 406 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 DDX47Q9H0S4 455 aaKnown RBP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CXCL16Q9H2A7 254 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CWH43Q9H720 699 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CNGB3Q9NQW8 809 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 MIOSQ9NXC5 875 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 EHD2Q9NZN4 543 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 STK39Q9UEW8 545 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 CYTH4Q9UIA0 394 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 USP18Q9UMW8 372 aa11.24□□□□□ -0.61
TRAPPC4-201ENST00000359005 SCN1AP35498 2009 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 FAM170AA1A519 330 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 LRRD1A4D1F6 860 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 F8VP50 259 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 CAPN9O14815 690 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 LRCH4O75427 683 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 AP1G2O75843 785 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 F9P00740 461 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 RALAP11233 206 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 LCP1P13796 627 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 IL9P15248 144 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 NOS2P35228 1153 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 GJC1P36383 396 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 PBX3P40426 434 aa11.23□□□□□ -0.61
TRAPPC4-201ENST00000359005 OR1G1P47890 313 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms