RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 RNF19BQ6ZMZ0 732 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 KCNK16Q96T55 309 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 RANBP17Q9H2T7 1088 aaKnown RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 DPP3Q9NY33 737 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 KLHL2O95198 593 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 MT-CO1P00395 513 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 ITGADQ13349 1161 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 TMEM39AQ9NV64 488 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 EIF3DO15371 548 aaKnown RBP eCLIP17.78■□□□□ 0.447e-7■□□□□ 10.3
COL27A1-201ENST00000356083 PRKCEQ02156 737 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 OLFML2AQ68BL7 652 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 FAAH2Q6GMR7 532 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 PSMC3IPQ9P2W1 217 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-201ENST00000356083 SSH2Q76I76 1423 aa17.78■□□□□ 0.44
COL27A1-201ENST00000356083 POTEAQ6S8J7 498 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 TFAP2DQ7Z6R9 452 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 ZNF671Q8TAW3 534 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 CENPXA8MT69 81 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 ZNF862O60290 1169 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 SLC25A12O75746 678 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 LTFP02788 710 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 GRIK3Q13003 919 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 DET1Q7L5Y6 550 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 RSPH1Q8WYR4 309 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 RFFLQ8WZ73 363 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 PHF21BQ96EK2 531 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 TRIM51Q9BSJ1 452 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 TEX13BQ9BXU2 312 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 BARHL2Q9NY43 387 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 TCHHQ07283 1943 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 PITPNM2Q9BZ72 1349 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 PRMT3O60678 531 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 CHRNB3Q05901 458 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 DMPKQ09013 629 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 REXO5Q96IC2 774 aaKnown RBP17.77■□□□□ 0.44
COL27A1-201ENST00000356083 KLC4Q9NSK0 619 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.77■□□□□ 0.44
COL27A1-201ENST00000356083 KCNQ2O43526 872 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 CST8O60676 142 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 TMC5Q6UXY8 1006 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 OMA1Q96E52 524 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 RPS6KL1Q9Y6S9 549 aa17.77■□□□□ 0.44
COL27A1-201ENST00000356083 MROH7-TTC4A0A0A0MT08 1334 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 ADCY6O43306 1168 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 CCNT2O60583 730 aaKnown RBP17.77■□□□□ 0.43
COL27A1-201ENST00000356083 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.43
COL27A1-201ENST00000356083 PIK3R1P27986 724 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 OTUD4Q01804 1114 aaKnown RBP17.77■□□□□ 0.43
COL27A1-201ENST00000356083 PTAR1Q7Z6K3 402 aaPredicted RBP17.77■□□□□ 0.43
COL27A1-201ENST00000356083 CDH24Q86UP0 819 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 HS6ST1O60243 411 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 DDR2Q16832 855 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 ZC2HC1CQ53FD0 456 aaPredicted RBP17.77■□□□□ 0.43
COL27A1-201ENST00000356083 ERMARDQ5T6L9 678 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 MYH3P11055 1940 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 PBRM1Q86U86 1689 aa17.77■□□□□ 0.43
COL27A1-201ENST00000356083 FAM220BPB1ANY3 271 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 MAGEB2O15479 319 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 KCNJ1P48048 391 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 NPY2RP49146 381 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 IL5RAQ01344 420 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 MAPK11Q15759 364 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 MRNIPQ6NTE8 343 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 GMCL1Q96IK5 515 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 ZMYM5Q9UJ78 669 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 ZMYM4Q5VZL5 1548 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 TRIM24O15164 1050 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 DHX34Q14147 1143 aaKnown RBP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 CTXN3Q4LDR2 81 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 EFHC1Q5JVL4 640 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 SLITRK2Q9H156 845 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 GRID1Q9ULK0 1009 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 SHOC2Q9UQ13 582 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 SRP54P61011 504 aaKnown RBP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 NR6A1Q15406 480 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 LINC00523Q86TU6 105 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 PDCD10Q9BUL8 212 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 KLHL28Q9NXS3 571 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 CFAP73A6NFT4 308 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 RSBN1Q5VWQ0 802 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 AGMOQ6ZNB7 445 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 CLEC10AQ8IUN9 316 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 ABCG4Q9H172 646 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 APEX2Q9UBZ4 518 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 ATP8B1O43520 1251 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 POMCP01189 267 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 THOP1P52888 689 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 UBXN6Q9BZV1 441 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 PABPC1P11940 636 aaKnown RBP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 DNAL1Q4LDG9 190 aa17.76■□□□□ 0.43
COL27A1-201ENST00000356083 C6orf62Q9GZU0 229 aaPredicted RBP17.76■□□□□ 0.43
COL27A1-201ENST00000356083 FAM187AA6NFU0 413 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 IL18RAPO95256 599 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 SLC1A1P43005 524 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 HERC6Q8IVU3 1022 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 KRT35Q92764 455 aa17.75■□□□□ 0.43
COL27A1-201ENST00000356083 MEI4A8MW99 385 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms