RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SNCBQ16143 134 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 CCT6BQ92526 530 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 RMDN2Q96LZ7 410 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 PAFAH2Q99487 392 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 TSPYL2Q9H2G4 693 aaPredicted RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 PAK5Q9P286 719 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 ST3GAL5Q9UNP4 418 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 CNTRLQ7Z7A1 2325 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 NEMP1O14524 444 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 MMP3P08254 477 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 PCSK1P29120 753 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 PMF1Q6P1K2 205 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 RASSF3Q86WH2 238 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 STKLD1Q8NE28 680 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 LMO3Q8TAP4 145 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 CLEC4CQ8WTT0 213 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 CCDC124Q96CT7 223 aaKnown RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 ST6GALNAC4Q9H4F1 302 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 ECT2Q9H8V3 914 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 CYP3A43Q9HB55 503 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 WHRNQ9P202 907 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 C4AP0C0L4 1744 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 TMEM191CA6NGB0 347 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 MAPK13O15264 365 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 TSPAN3O60637 253 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 ATXN3P54252 364 aaPredicted RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 GTF3C2Q8WUA4 911 aaPredicted RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 RUBCNQ92622 972 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 TRPC7Q9HCX4 862 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 NAV1Q8NEY1 1877 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 CCDC160A6NGH7 325 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 KBTBD13C9JR72 458 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 PQBP1O60828 265 aaKnown RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 HSPA4LO95757 839 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 AKR1A1P14550 325 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 AARSP49588 968 aaKnown RBP eCLIP16.64■□□□□ 0.25
SYNM-201ENST00000328642 MBTD1Q05BQ5 628 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 RPS6KA2Q15349 733 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 NBPF20Q3BBV1 942 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 SYDE1Q6ZW31 735 aaPredicted RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 HDAC11Q96DB2 347 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 LGMNQ99538 433 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 SNRNP25Q9BV90 132 aaKnown RBP16.64■□□□□ 0.25
SYNM-201ENST00000328642 PSD3Q9NYI0 1048 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 IL1RAPL1Q9NZN1 696 aa16.64■□□□□ 0.25
SYNM-201ENST00000328642 OR4Q2P0C623 313 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ICAM3P32942 547 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ARFIP2P53365 341 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 YWHAZP63104 245 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 BST2Q10589 180 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 CRELD2Q6UXH1 353 aaPredicted RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 SP110Q9HB58 689 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ZFP69BQ9UJL9 534 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 UBA6A0AVT1 1052 aaPredicted RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 SIGLEC16A6NMB1 481 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 GPC4O75487 556 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 RPL22P35268 128 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 RAD23BP54727 409 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ASPHQ12797 758 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 EFEMP1Q12805 493 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ZNF268Q14587 947 aaPredicted RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 CNGA2Q16280 664 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 DDX60Q8IY21 1712 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 GLIS1Q8NBF1 620 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 PPP1R12AO14974 1030 aaPredicted RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 LRCH4O75427 683 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 PYGBP11216 843 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 SOX11P35716 441 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 GLRBP48167 497 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 MCL1Q07820 350 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 CCDC142Q17RM4 750 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 C10orf120Q5SQS8 335 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 LRRC6Q86X45 466 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 NPLOC4Q8TAT6 608 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 TFB1MQ8WVM0 346 aaKnown RBP16.63■□□□□ 0.25
SYNM-201ENST00000328642 VCPIP1Q96JH7 1222 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 ZNF112Q9UJU3 913 aa16.63■□□□□ 0.25
SYNM-201ENST00000328642 LOC100653049A0A140TA62 436 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 KRT34O76011 436 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 AVPR1AP37288 418 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 RASSF2P50749 326 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 CLNS1AP54105 237 aaKnown RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 CRLF3Q8IUI8 442 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 PRDM4Q9UKN5 801 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 NRCAMQ92823 1304 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 SMIM28A0A1B0GU29 152 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 TSPAN1O60635 241 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 CASP2P42575 452 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 ALDH18A1P54886 795 aaKnown RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 SLC6A3Q01959 620 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 ARHGAP1Q07960 439 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 MON1BQ7L1V2 547 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 PPFIBP2Q8ND30 876 aa16.62■□□□□ 0.25
SYNM-201ENST00000328642 ZC3H15Q8WU90 426 aaKnown RBP16.62■□□□□ 0.25
SYNM-201ENST00000328642 RMDN1Q96DB5 314 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms