RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SDE2Q6IQ49 451 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 LBX2Q6XYB7 198 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 REXO1L1PQ8IX06 675 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 SLC30A5Q8TAD4 765 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 MAML3Q96JK9 1138 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TRAPPC9Q96Q05 1148 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 SENP7Q9BQF6 1050 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 RAB6BQ9NRW1 208 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TMEM260Q9NX78 707 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 H2AFY2Q9P0M6 372 aaPredicted RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 TFR2Q9UP52 801 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 FARP1Q9Y4F1 1045 aaPredicted RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 SNX13Q9Y5W8 968 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 C1orf232A0A0U1RR37 186 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PDZK1P1A8MUH7 402 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 C5orf58C9J3I9 102 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 ALDH1A3P47895 512 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PPIDQ08752 370 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 KCNMA1Q12791 1236 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TRIM71Q2Q1W2 868 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 EFHC2Q5JST6 749 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 NIPA1Q7RTP0 329 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 NANOGNBQ7Z5D8 188 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 ST13P5Q8NFI4 369 aaPredicted RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 APBB2Q92870 758 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 LRRC39Q96DD0 335 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 C12orf42Q96LP6 360 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 KLHL31Q9H511 634 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 L2HGDHQ9H9P8 463 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PRDM4Q9UKN5 801 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 GRID1Q9ULK0 1009 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 POTEFA5A3E0 1075 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 O00370 1275 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 POTEIP0CG38 1075 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 RECQLP46063 649 aaPredicted RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 GEMIN4P57678 1058 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 KCNK10P57789 538 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 FPGSQ05932 587 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PDIA5Q14554 519 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 WDR93Q6P2C0 686 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 POTEGQ6S5H5 508 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 POTEEQ6S8J3 1075 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 CXCL17Q6UXB2 119 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 KDELC2Q7Z4H8 507 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 SRBD1Q8N5C6 995 aaKnown RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 RBBP8NLQ8NC74 664 aaPredicted RBP8.47□□□□□ -1.05
VPS41-202ENST00000310301 C15orf41Q9Y2V0 281 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 NRCAMQ92823 1304 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 XYLBO75191 536 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 MFN2O95140 757 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 CYBBP04839 570 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 GYPCP04921 128 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TP53BP2Q13625 1128 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TMEM132BQ14DG7 1078 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 CENPPQ6IPU0 288 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 BBS7Q8IWZ6 715 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 FBXO22Q8NEZ5 403 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 ARHGEF26Q96DR7 871 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 PLEKHA8Q96JA3 519 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 ANKRD27Q96NW4 1050 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 TMEM117Q9H0C3 514 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
VPS41-202ENST00000310301 DFFAO00273 331 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 ALDH2P05091 517 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 TCF3P15923 654 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 ZNF23P17027 643 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 SERPINB5P36952 375 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 SEMA3FQ13275 785 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 PLD1Q13393 1074 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 KIZQ2M2Z5 673 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 ENOSF1Q7L5Y1 443 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 CD302Q8IX05 232 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 DIS3LQ8TF46 1054 aaKnown RBP8.46□□□□□ -1.05
VPS41-202ENST00000310301 ATP8B4Q8TF62 1192 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 HPS3Q969F9 1004 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 KIF12Q96FN5 646 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 TNIP3Q96KP6 325 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 FAM129AQ9BZQ8 928 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 HPS4Q9NQG7 708 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 EYA4O95677 639 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 GHRP10912 638 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 RALAP11233 206 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 MUTP22033 750 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 CALB2P22676 271 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 AXLP30530 894 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 SARSP49591 514 aaKnown RBP8.46□□□□□ -1.05
VPS41-202ENST00000310301 KLK7P49862 253 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 SLC9A5Q14940 896 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 GRIK4Q16099 956 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 TREML2Q5T2D2 321 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 TNIP2Q8NFZ5 429 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 ZNF483Q8TF39 744 aaPredicted RBP8.46□□□□□ -1.05
VPS41-202ENST00000310301 SCFD1Q8WVM8 642 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 AGAP3Q96P47 875 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 TRIM54Q9BYV2 358 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 C17orf75Q9HAS0 396 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 SP110Q9HB58 689 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 MRGBPQ9NV56 204 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 APPL1Q9UKG1 709 aa8.46□□□□□ -1.05
VPS41-202ENST00000310301 FBXL21Q9UKT6 434 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms