RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 GDAP1L1Q96MZ0 367 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 SH3GL2Q99962 352 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 PAAF1Q9BRP4 392 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 MED10Q9BTT4 135 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 TXLNGYQ9BZA5 131 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 TSPYL1Q9H0U9 437 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPM3-202ENST00000302206 MTRF1LQ9UGC7 380 aaKnown RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 SNX24Q9Y343 169 aa12.55□□□□□ -0.4
TPM3-202ENST00000302206 SPTBN5Q9NRC6 3674 aaKnown RBP12.55□□□□□ -0.4
TPM3-202ENST00000302206 AGPSO00116 658 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PIK3R2O00459 728 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 LCP1P13796 627 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 ACAT1P24752 427 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 MATKP42679 507 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 VCPP55072 806 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 MRPS5P82675 430 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 GABPB1Q06547 395 aaPredicted RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 SNX1Q13596 522 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 TFDP2Q14188 446 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 TAF5Q15542 800 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 C15orf59Q2T9L4 293 aaPredicted RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 RAB41Q5JT25 222 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 CLLU1OSQ5K130 101 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 ZNF697Q5TEC3 545 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PSTKQ8IV42 348 aaKnown RBP12.54□□□□□ -0.4
TPM3-202ENST00000302206 GOLGA6L1Q8N7Z2 621 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 FAM172AQ8WUF8 416 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 ATG4AQ8WYN0 398 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 SEPT8Q92599 483 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 SNF8Q96H20 258 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 CFAP57Q96MR6 1250 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PKMYT1Q99640 499 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 FOXP3Q9BZS1 431 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 TRIM31Q9BZY9 425 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PRDM16Q9HAZ2 1276 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 LRRC4Q9HBW1 653 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PNPLA8Q9NP80 782 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 CNGB3Q9NQW8 809 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 CACNG4Q9UBN1 327 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 PCSK1NQ9UHG2 260 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 INPP5FQ9Y2H2 1132 aa12.54□□□□□ -0.4
TPM3-202ENST00000302206 MYBPHLA2RUH7 354 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 GOLGA8KD6RF30 607 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 APOC4-APOC2K7ER74 178 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 CLDN5O00501 218 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ENPP3O14638 875 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 HOXA2O43364 376 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 NBNO60934 754 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 GRAP2O75791 330 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 AP1G2O75843 785 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SYF2O95926 243 aaKnown RBP12.53□□□□□ -0.4
TPM3-202ENST00000302206 APOC2P02655 101 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ATF2P15336 505 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 IVDP26440 423 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 KLRC2P26717 231 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 NOS2P35228 1153 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 HSD17B3P37058 310 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 GGCXP38435 758 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 PLTPP55058 493 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 HDAC4P56524 1084 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ADCY2Q08462 1091 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ADIGQ0VDE8 80 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 CALCOCO2Q13137 446 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SLMAPQ14BN4 828 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 LLGL1Q15334 1064 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 OASLQ15646 514 aaKnown RBP12.53□□□□□ -0.4
TPM3-202ENST00000302206 SMTNL2Q2TAL5 461 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 KCNT1Q5JUK3 1230 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SH3PXD2AQ5TCZ1 1133 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 KAZNQ674X7 775 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ZNF365Q70YC5 407 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ANKRD33Q7Z3H0 272 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 BNIPLQ7Z465 357 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SIX6OS1Q8N1H7 587 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 ALLCQ8N6M5 410 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 PIK3R5Q8WYR1 880 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 IRGQQ8WZA9 623 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 PCED1BQ96HM7 432 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 CCDC114Q96M63 670 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SLC2A13Q96QE2 648 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 SMOQ99835 787 aa12.53□□□□□ -0.4
TPM3-202ENST00000302206 NGRNQ9NPE2 291 aaKnown RBP12.53□□□□□ -0.4
TPM3-202ENST00000302206 RRN3Q9NYV6 651 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms