RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NUP93Q8N1F7 819 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 C2orf15Q8WU43 125 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 RXFP2Q8WXD0 754 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 EDEM1Q92611 657 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 FAM149B1Q96BN6 582 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 ADAM33Q9BZ11 813 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 MRPL47Q9HD33 250 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 NGRNQ9NPE2 291 aaKnown RBP10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 USTQ9Y2C2 406 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 YIPF1Q9Y548 306 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 IRAK3Q9Y616 596 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 USP3Q9Y6I4 520 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 SCINQ9Y6U3 715 aa10.22□□□□□ -0.77
SNRNP40-201ENST00000263694 TRANK1O15050 2925 aa10.21□□□□□ -0.77
SNRNP40-201ENST00000263694 MYO1FO00160 1098 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 LPXNO60711 386 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 CLASP2O75122 1294 aaKnown RBP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 FYNP06241 537 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 ADH1AP07327 375 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 PDGFRAP16234 1089 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 EPCAMP16422 314 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 COMTP21964 271 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 GTF2F1P35269 517 aaKnown RBP eCLIP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 TUFMP49411 452 aaKnown RBP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 HADHBP55084 474 aaKnown RBP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 SNX16P57768 344 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 RPL10AP62906 217 aaKnown RBP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 PITX1P78337 314 aaPredicted RBP10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 CREMQ03060 361 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 TWF1Q12792 350 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 SYPL2Q5VXT5 272 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 PM20D1Q6GTS8 502 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 DENND5BQ6ZUT9 1274 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC26A9Q7LBE3 791 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 TCEAL8Q8IYN2 117 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 DEFB106AQ8N104 65 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 ARFGAP1Q8N6T3 406 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 KREMEN2Q8NCW0 462 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC7A14Q8TBB6 771 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 CFAP57Q96MR6 1250 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 EMILIN2Q9BXX0 1053 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 CNGB3Q9NQW8 809 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 NUDT5Q9UKK9 219 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 NAALADL1Q9UQQ1 740 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 ALG6Q9Y672 507 aa10.21□□□□□ -0.78
SNRNP40-201ENST00000263694 COL4A4P53420 1690 aaPredicted RBP10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 A0A1W2PQH9 124 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 C2CD4BA6NLJ0 364 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 PROSCO94903 275 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 FBXO21O94952 628 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 GLUD1P00367 558 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 LTFP02788 710 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 ATP1A1P05023 1023 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 PSMA2P25787 234 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 ALDH1A3P47895 512 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 CLCN4P51793 760 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 YWHAZP63104 245 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 ATP11AP98196 1134 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 IFI16Q16666 785 aaKnown RBP10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 CDO1Q16878 200 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 CCDC14Q49A88 953 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 DCAF6Q58WW2 860 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 EFHC1Q5JVL4 640 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SLFN11Q7Z7L1 901 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SCD5Q86SK9 330 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 ZDHHC17Q8IUH5 632 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SLC22A17Q8WUG5 538 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SPATA17Q96L03 361 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 ALS2CR12Q96Q35 445 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 PSMB7Q99436 277 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 NMUR1Q9HB89 426 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 PNPLA8Q9NP80 782 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 OSER1Q9NX31 292 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 IL37Q9NZH6 218 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 GMIPQ9P107 970 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 FBXW11Q9UKB1 542 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 INSL5Q9Y5Q6 135 aa10.2□□□□□ -0.78
SNRNP40-201ENST00000263694 SYNJ2BP-COX16A0A087WUM0 186 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 RFPL2O75678 378 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 C8AP07357 584 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 HMGA1P17096 107 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 GPD1P21695 349 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 YWHAQP27348 245 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 CASQ1P31415 396 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 GJC1P36383 396 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 SSR1P43307 286 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 MARCKSL1P49006 195 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 ATXN1P54253 815 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 TAS2R40P59535 323 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 TAF10Q12962 218 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 DNTTIP2Q5QJE6 756 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 ZNF697Q5TEC3 545 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 MEI1Q5TIA1 1274 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 BSPRYQ5W0U4 402 aa10.19□□□□□ -0.78
SNRNP40-201ENST00000263694 C11orf63Q6NUN7 778 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms