RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 GABBR2O75899 941 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 CBLBQ13191 982 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 C9orf57Q5W0N0 161 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 ZDHHC17Q8IUH5 632 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 ANKMY2Q8IV38 441 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 DENND1AQ8TEH3 1009 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 C18orf25Q96B23 403 aaPredicted RBP22.85■■□□□ 1.25
RNF39-201ENST00000244360 TXLNGQ9NUQ3 528 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 PSMC3IPQ9P2W1 217 aaPredicted RBP22.85■■□□□ 1.25
RNF39-201ENST00000244360 GGT7Q9UJ14 662 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 RABGEF1Q9UJ41 708 aa22.85■■□□□ 1.25
RNF39-201ENST00000244360 TCRBV7S3A2A0A539 114 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 GRAP2O75791 330 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 PHBP35232 272 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 NPNTQ6UXI9 565 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 MAP7D3Q8IWC1 876 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 PYROXD1Q8WU10 500 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 SMC6Q96SB8 1091 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 DHRS4Q9BTZ2 278 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 TRABDQ9H4I3 376 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 GNEQ9Y223 722 aaKnown RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 PAPSS1O43252 624 aaPredicted RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 CCND1P24385 295 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 IL4RP24394 825 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 FOXN2P32314 431 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 WDR4P57081 412 aaKnown RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 SNX16P57768 344 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 PKN2Q16513 984 aaKnown RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 SOWAHAQ2M3V2 549 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 RTP4Q96DX8 246 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 RMDN2Q96LZ7 410 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 RAB3IPQ96QF0 476 aaPredicted RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 OSMRQ99650 979 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 PTPN18Q99952 460 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 NXF3Q9H4D5 531 aaKnown RBP22.84■■□□□ 1.25
RNF39-201ENST00000244360 FAM49BQ9NUQ9 324 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 HESX1Q9UBX0 185 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 GJD2Q9UKL4 321 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 GINS2Q9Y248 185 aa22.84■■□□□ 1.25
RNF39-201ENST00000244360 ZNF487B1APH4 448 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 RECQL4O94761 1208 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 AXLP30530 894 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 SDC4P31431 198 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 GEMIN4P57678 1058 aaKnown RBP22.83■■□□□ 1.25
RNF39-201ENST00000244360 SETDB1Q15047 1291 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 CDO1Q16878 200 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 SPRYD7Q5W111 196 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 FAM172AQ8WUF8 416 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 TBC1D31Q96DN5 1066 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 ACSS3Q9H6R3 686 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 XPO7Q9UIA9 1087 aaKnown RBP22.83■■□□□ 1.25
RNF39-201ENST00000244360 UBQLN1Q9UMX0 589 aaKnown RBP22.83■■□□□ 1.25
RNF39-201ENST00000244360 HES2Q9Y543 173 aa22.83■■□□□ 1.25
RNF39-201ENST00000244360 MDM4O15151 490 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 DYNC1LI2O43237 492 aaPredicted RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 TGM2P21980 687 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 ADAM17P78536 824 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 RNASELQ05823 741 aaKnown RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 PDE4CQ08493 712 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 KRT81Q14533 505 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 DARS2Q6PI48 645 aaKnown RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 CAPN12Q6ZSI9 719 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 ECHDC2Q86YB7 292 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PDIK1LQ8N165 341 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PQLC3Q8N755 202 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PLD5Q8N7P1 536 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 FAF2Q96CS3 445 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PCDH18Q9HCL0 1135 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 SSU72Q9NP77 194 aaKnown RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 CLEC11AQ9Y240 323 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PDCD11Q14690 1871 aaKnown RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 UNC5CO95185 931 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 CYP2C9P11712 490 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 SCNN1AP37088 669 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 RPL34P49207 117 aaKnown RBP22.82■■□□□ 1.24
RNF39-201ENST00000244360 ATP11AP98196 1134 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 KCNJ11Q14654 390 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 SLC9A4Q6AI14 798 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 USP29Q9HBJ7 922 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 SLC5A4Q9NY91 659 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 USH1CQ9Y6N9 552 aa22.82■■□□□ 1.24
RNF39-201ENST00000244360 PIRO00625 290 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 WFS1O76024 890 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 KRT15P19012 456 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 MSH2P43246 934 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 PDK4Q16654 411 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 KLHL38Q2WGJ6 581 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 ZC3H12AQ5D1E8 599 aaKnown RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 GLRA4Q5JXX5 417 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 TLDC1Q6P9B6 456 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 FBXO36Q8NEA4 188 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 N4BP2L2Q92802 583 aaPredicted RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 RSRC1Q96IZ7 334 aaKnown RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 C11orf84Q9BUA3 381 aaPredicted RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 NGRNQ9NPE2 291 aaKnown RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 NOP53Q9NZM5 478 aaKnown RBP22.81■■□□□ 1.24
RNF39-201ENST00000244360 SSTR1P30872 391 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 PTPN9P43378 593 aa22.81■■□□□ 1.24
RNF39-201ENST00000244360 BASP1P80723 227 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms